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  5. Gb_11316

Gb_11316 (ATMIXTA, MYB16, ATMYB16)


Aliases : ATMIXTA, MYB16, ATMYB16

Description : transcription factor (MYB)


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_11316

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00150140 ATMYB65, MYB65,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.02 OrthoFinder output from all 47 species
Aob_g14743 AtMYB20, MYB20 MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000232001 ATMYB4, MYB4 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01030434001 ATMYB101, MYB101, ATM1 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01032452001 MYB24, AtMYB24 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01032467001 MYB66, ATMYB66, WER, WER1 RNA biosynthesis.transcriptional activation.MYB... 0.07 OrthoFinder output from all 47 species
LOC_Os02g46780.1 MYB58, ATMYB58,... transcription factor (MYB) 0.06 OrthoFinder output from all 47 species
LOC_Os04g42950.1 AtMYB79, MYB79,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g49310.1 ATMYB21, MYB21,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os07g37210.1 MYB41, AtMYB41,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os12g33070.1 ATMYB46, MYB46,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp3g05910.1 MYB33, ATMYB33 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Pir_g59447 MYB106, NOK, AtMYB106 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g005870.2.1 MYB3, ATMYB3,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Spa_g06828 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Zm00001e001404_P001 ATMYB12, PFG1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e001409_P001 ATMYB12, PFG1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e003407_P001 AtMYB93, MYB93,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e028135_P001 MYB86, ATMYB86,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 112
No external refs found!