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  5. Gb_10978

Gb_10978 (ATPAL2, PAL2)


Aliases : ATPAL2, PAL2

Description : phenylalanine ammonia lyase (PAL)


Gene families : OG0000270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000270_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10978

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00159210 PAL4,... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 OrthoFinder output from all 47 species
Aev_g37417 ATPAL2, PAL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05556.t1 PAL4, Aspi01Gene05556 EC_4.3 carbon-nitrogen lyase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01024292001 ATPAL1, PAL1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 OrthoFinder output from all 47 species
GSVIVT01024295001 ATPAL1, PAL1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
Gb_26650 PAL4 phenylalanine ammonia lyase (PAL) 0.04 OrthoFinder output from all 47 species
LOC_Os02g41670.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
LOC_Os02g41680.1 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species
Ore_g40543 ATPAL1, PAL1 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c11_3080V3.1 Pp3c11_3080 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c22_17310V3.1 Pp3c22_17310 phenyl alanine ammonia-lyase 3 0.02 OrthoFinder output from all 47 species
Pp3c7_24510V3.1 PAL3, ATPAL3, Pp3c7_24510 phenylalanine ammonia-lyase 4 0.02 OrthoFinder output from all 47 species
Ppi_g57238 PAL4 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g011920.3.1 ATPAL1, PAL1,... Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... 0.04 OrthoFinder output from all 47 species
Solyc10g011930.1.1 ATPAL1, PAL1,... Phenylalanine ammonia-lyase OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Zm00001e015156_P001 ATPAL1, PAL1,... phenylalanine ammonia lyase (PAL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 207 450
IPR001106 Aromatic_Lyase 70 196
No external refs found!