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Gb_10869


Description : E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana (sp|q8lpn7|rng1l_arath : 239.0)


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Gb_10869

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00170820 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT3G10815 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000227.13 RHC1A No description available 0.03 OrthoFinder output from all 47 species
LOC_Os05g40980.1 LOC_Os05g40980 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Len_g20588 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Lfl_g24820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 11 41
IPR001841 Znf_RING 216 258
No external refs found!