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Aliases : AML1, RPS5A, ATRPS5A
Description : component RPS5 of SSU proteome
Gene families : OG0002478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002478_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00068p00119380 | RPS5B, ATRPS5B,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00090p00050460 | RPS5B, ATRPS5B,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G37270 | RPS5B, ATRPS5B | ribosomal protein 5B | 0.04 | OrthoFinder output from all 47 species | |
| AT3G11940 | AML1, RPS5A, ATRPS5A | ribosomal protein 5A | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene45317.t1 | RPS5B, ATRPS5B,... | component *(uS7) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0374.g067208 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20695 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021332.10 | RPS5B, ATRPS5B | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Cre06.g290950 | RPS5B, ATRPS5B | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g10905 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01026328001 | RPS5B, ATRPS5B | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01033419001 | RPS5B, ATRPS5B | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_04954 | RPS5B, ATRPS5B | component RPS5 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g29190.1 | RPS5B, ATRPS5B,... | component RPS5 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Len_g46813 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g27142 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g10570.1 | RPS5B, ATRPS5B | component RPS5 of SSU proteome | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g09424 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c20_18970V3.1 | RPS5B, ATRPS5B,... | ribosomal protein 5B | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c23_6150V3.1 | RPS5B, ATRPS5B,... | ribosomal protein 5B | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c8_16820V3.1 | RPS5B, ATRPS5B,... | ribosomal protein 5B | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c8_16860V3.1 | RPS5B, ATRPS5B,... | ribosomal protein 5B | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g15969 | No alias | component *(uS7) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Smo164593 | AML1, RPS5A, ATRPS5A | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g078620.1.1 | AML1, RPS5A,... | component RPS5 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g042610.2.1 | RPS5B, ATRPS5B,... | component RPS5 of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g17272 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g37870 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g01481 | RPS5B, ATRPS5B | component *(uS7) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e025608_P002 | RPS5B, ATRPS5B,... | component RPS5 of SSU proteome | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e031425_P002 | AML1, RPS5A,... | component RPS5 of SSU proteome | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023798 | Ribosomal_S7_dom | 66 | 207 |
| No external refs found! |