1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_10186

Gb_10186 (AtTLP8, TLP8)


Aliases : AtTLP8, TLP8

Description : transcription factor (TUB)


Gene families : OG0004261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004261_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_10186
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT1G16070 AtTLP8, TLP8 tubby like protein 8 0.06 OrthoFinder output from all 47 species
Als_g03648 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene46266.t1 AtTLP8, TLP8,... TUB-type transcription factor & original description: none 0.1 OrthoFinder output from all 47 species
Ceric.03G003600.1 AtTLP8, TLP8,... TUB-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g04627 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01016095001 AtTLP8, TLP8 RNA biosynthesis.transcriptional activation.TUB... 0.12 OrthoFinder output from all 47 species
LOC_Os02g08310.1 AtTLP8, TLP8,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
MA_13250g0010 AtTLP8, TLP8 transcription factor (TUB) 0.09 OrthoFinder output from all 47 species
Nbi_g02347 AtTLP8, TLP8 TUB-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0158.g023802 AtTLP8, TLP8 TUB-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g03337 No alias TUB-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Solyc03g117730.3.1 AtTLP8, TLP8,... transcription factor (TUB) 0.06 OrthoFinder output from all 47 species
Zm00001e013819_P001 AtTLP8, TLP8,... transcription factor (TUB) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR000007 Tubby_C 170 394
No external refs found!