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  5. Gb_09954

Gb_09954 (VCL1, EMB258, MAN)


Aliases : VCL1, EMB258, MAN

Description : component VPS16/VCL1 of HOPS/CORVET membrane tethering complexes


Gene families : OG0004533 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004533_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09954

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00200210 VCL1, EMB258,... Vesicle trafficking.target membrane... 0.04 OrthoFinder output from all 47 species
Adi_g022790 VCL1, EMB258, MAN component *(VPS16/VCL1) of HOPS/CORVET membrane... 0.02 OrthoFinder output from all 47 species
Aev_g06149 VCL1, EMB258, MAN component *(VPS16/VCL1) of HOPS/CORVET membrane... 0.05 OrthoFinder output from all 47 species
Als_g01127 VCL1, EMB258, MAN component *(VPS16/VCL1) of HOPS/CORVET membrane... 0.04 OrthoFinder output from all 47 species
Dcu_g04890 VCL1, EMB258, MAN component *(VPS16/VCL1) of HOPS/CORVET membrane... 0.05 OrthoFinder output from all 47 species
GSVIVT01020844001 VCL1, EMB258, MAN Vesicle trafficking.target membrane... 0.04 OrthoFinder output from all 47 species
Lfl_g10179 VCL1, EMB258, MAN component *(VPS16/VCL1) of HOPS/CORVET membrane... 0.07 OrthoFinder output from all 47 species
MA_10431485g0010 VCL1, EMB258, MAN component VPS16/VCL1 of HOPS/CORVET membrane tethering complexes 0.03 OrthoFinder output from all 47 species
MA_74180g0010 VCL1, EMB258, MAN Protein VACUOLELESS1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g01660.1 VCL1, EMB258, MAN component VPS16/VCL1 of HOPS/CORVET membrane tethering complexes 0.02 OrthoFinder output from all 47 species
Nbi_g01353 VCL1, EMB258, MAN component *(VPS16/VCL1) of HOPS/CORVET membrane... 0.04 OrthoFinder output from all 47 species
Ore_g19088 VCL1, EMB258, MAN component *(VPS16/VCL1) of HOPS/CORVET membrane... 0.02 OrthoFinder output from all 47 species
Smo80688 VCL1, EMB258, MAN Vesicle trafficking.target membrane... 0.05 OrthoFinder output from all 47 species
Solyc07g056220.3.1 VCL1, EMB258,... component VPS16/VCL1 of HOPS/CORVET membrane tethering complexes 0.06 OrthoFinder output from all 47 species
Zm00001e028014_P001 VCL1, EMB258,... component VPS16/VCL1 of HOPS/CORVET membrane tethering complexes 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR006926 Vps16_N 7 407
IPR006925 Vps16_C 505 597
No external refs found!