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  5. Gb_09762

Gb_09762


Description : prohibitin component of FtsH3/10 matrix-AAA protease heterodimers


Gene families : OG0002891 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002891_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09762

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00162380 ATPHB3, PHB3,... Protein degradation.peptidase families.metallopeptidase... 0.02 OrthoFinder output from all 47 species
AT3G27280 PHB4, ATPHB4 prohibitin 4 0.04 OrthoFinder output from all 47 species
AT5G40770 ATPHB3, PHB3 prohibitin 3 0.03 OrthoFinder output from all 47 species
Aspi01Gene00129.t1 ATPHB3, PHB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03283.t1 ATPHB3, PHB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G044400.1 ATPHB3, PHB3,... component of FtsH3/10 matrix-AAA protease heterodimer &... 0.02 OrthoFinder output from all 47 species
LOC_Os04g38900.1 ATPHB3, PHB3,... prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.01 OrthoFinder output from all 47 species
MA_18599g0010 ATPHB3, PHB3 prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.02 OrthoFinder output from all 47 species
Msp_g02732 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.07 OrthoFinder output from all 47 species
Pir_g01191 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.01 OrthoFinder output from all 47 species
Pp3c23_22260V3.1 PHB4, ATPHB4,... prohibitin 4 0.02 OrthoFinder output from all 47 species
Ppi_g00572 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010817 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.01 OrthoFinder output from all 47 species
Sam_g13008 No alias component of FtsH3/10 matrix-AAA protease heterodimer &... 0.03 OrthoFinder output from all 47 species
Solyc11g010190.1.1 ATPHB3, PHB3,... prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.03 OrthoFinder output from all 47 species
Solyc11g013260.3.1 ATPHB3, PHB3,... prohibitin component of FtsH3/10 matrix-AAA protease heterodimers 0.03 OrthoFinder output from all 47 species
Spa_g18847 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.02 OrthoFinder output from all 47 species
Spa_g48452 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.02 OrthoFinder output from all 47 species
Tin_g05866 ATPHB3, PHB3 component of FtsH3/10 matrix-AAA protease heterodimer &... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001107 Band_7 33 210
No external refs found!