1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_09707

Gb_09707


Description : Probable 2-oxoglutarate-dependent dioxygenase At3g111800 OS=Arabidopsis thaliana (sp|q9srm3|diox6_arath : 193.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 175.7)


Gene families : OG0000150 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000150_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09707
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00073p00093410 FLS1, ATFLS1,... Secondary metabolism.phenolics.flavonoid synthesis and... 0.02 OrthoFinder output from all 47 species
GSVIVT01013255001 SRG1, ATSRG1 S-norcoclaurine synthase 1 OS=Coptis japonica 0.05 OrthoFinder output from all 47 species
GSVIVT01021353001 SRG1, ATSRG1 RNA biosynthesis.transcriptional activation.C3H zinc... 0.05 OrthoFinder output from all 47 species
Gb_24113 FLS1, ATFLS1, FLS flavonol synthase. anthocyanidin synthase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR026992 DIOX_N 52 83
IPR005123 Oxoglu/Fe-dep_dioxygenase 146 243
No external refs found!