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  5. Gb_09218

Gb_09218


Description : Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana (sp|q9c7a2|itn1_arath : 126.0)


Gene families : OG0001496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001496_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09218

Target Alias Description ECC score Gene Family Method Actions
AT4G03450 No alias Ankyrin repeat family protein 0.04 OrthoFinder output from all 47 species
AT4G03460 No alias Ankyrin repeat family protein 0.03 OrthoFinder output from all 47 species
AT4G03495 No alias No description available 0.04 OrthoFinder output from all 47 species
AT4G14400 ACD6 ankyrin repeat family protein 0.03 OrthoFinder output from all 47 species
GSVIVT01001629001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01010731001 No alias Ankyrin repeat-containing protein At5g02620... 0.04 OrthoFinder output from all 47 species
GSVIVT01020522001 No alias Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01020895001 No alias Ankyrin repeat-containing protein At5g02620... 0.02 OrthoFinder output from all 47 species
GSVIVT01030364001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_00335 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_26468 No alias Ankyrin repeat-containing protein At5g02620... 0.02 OrthoFinder output from all 47 species
Gb_26480 No alias Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os07g29940.1 LOC_Os07g29940 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g17120.1 LOC_Os09g17120 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g14630.1 LOC_Os11g14630 Ankyrin repeat-containing protein At2g01680... 0.04 OrthoFinder output from all 47 species
LOC_Os11g15460.1 LOC_Os11g15460 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc05g055970.4.1 Solyc05g055970 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR026961 PGG_dom 403 509
IPR020683 DUF3447 135 225
IPR020683 DUF3447 232 293
IPR020683 DUF3447 5 95
No external refs found!