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  5. Gb_09162

Gb_09162


Description : no hits & (original description: none)


Gene families : OG0000227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_09162
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00207190 ERDJ3B,... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00017p00209650 evm_27.TU.AmTr_v1... Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00041p00168770 evm_27.TU.AmTr_v1... Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00131740 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT2G17880 No alias Chaperone DnaJ-domain superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g01968 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08419 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09684 J20 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g21455 J20 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g38917 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g00782 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07977 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08251 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34742 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g25607 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61814.t1 Aspi01Gene61814 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61816.t1 Aspi01Gene61816 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene61820.t1 Aspi01Gene61820 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61824.t1 Aspi01Gene61824 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61832.t1 Aspi01Gene61832 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0021.g015886 J20 not classified & original description: CDS=137-550 0.03 OrthoFinder output from all 47 species
Azfi_s0024.g020416 No alias not classified & original description: CDS=52-738 0.03 OrthoFinder output from all 47 species
Ceric.20G067600.1 Ceric.20G067600 not classified & original description: pacid=50566614... 0.04 OrthoFinder output from all 47 species
Dac_g20831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29259 ERDJ3B, ATERDJ3B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g00693 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g02611 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g22715 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08216 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04446 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006408001 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_01235 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_05958 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_09159 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
LOC_Os03g20730.1 J2, ATJ2, LOC_Os03g20730 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g56825 J20 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g09494 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10085613g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10427494g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_14181g0010 J20 Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_17150g0010 ATP58IPK, P58IPK no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_241669g0010 ERDJ3B, ATERDJ3B Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_276247g0010 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_281725g0010 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_5763182g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_57712g0010 J20 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_57712g0020 J20 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_73139g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_954466g0010 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_9622241g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp2g20430.1 J20 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g44965 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g33740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31687 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08236 ATDJC39, ARL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08237 ATDJC39, ARL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19359 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003473 No alias not classified & original description: CDS=1-837 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020373 J20 not classified & original description: CDS=1-741 0.03 OrthoFinder output from all 47 species
Smo100874 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo441708 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc02g062160.1.1 Solyc02g062160 Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc07g065960.1.1 Solyc07g065960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc07g065970.1.1 Solyc07g065970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g13667 OWL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54931 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001518_P001 J2, ATJ2, Zm00001e001518 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e024686_P001 Zm00001e024686 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e025612_P001 J20, Zm00001e025612 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 77 132
No external refs found!