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Gb_08870


Description : Ankyrin repeat-containing protein NPR4 OS=Oryza sativa subsp. japonica (sp|a2cir5|npr4_orysj : 103.0)


Gene families : OG0001496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001496_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08870
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
AT4G14400 ACD6 ankyrin repeat family protein 0.02 OrthoFinder output from all 47 species
GSVIVT01001633001 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01001639001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_26479 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_26484 No alias Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os07g09530.1 LOC_Os07g09530 Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os09g16240.1 LOC_Os09g16240 Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os11g09190.1 LOC_Os11g09190 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g15460.1 LOC_Os11g15460 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc05g055960.1.1 Solyc05g055960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e031178_P002 Zm00001e031178 Ankyrin repeat-containing protein At5g02620... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR026961 PGG_dom 483 587
IPR002110 Ankyrin_rpt 273 293
IPR020683 DUF3447 153 217
IPR020683 DUF3447 316 412
IPR020683 DUF3447 44 132
No external refs found!