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  5. Gb_08148

Gb_08148 (CAM3, acam-3)


Aliases : CAM3, acam-3

Description : Calmodulin OS=Solanum lycopersicum (sp|p27161|calm_sollc : 289.0)


Gene families : OG0000295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08148

Target Alias Description ECC score Gene Family Method Actions
AT2G41110 ATCAL5, CAM2 calmodulin 2 0.03 OrthoFinder output from all 47 species
Adi_g109551 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15347 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_15317 CAM3, acam-3 Calmodulin OS=Medicago sativa (sp|p17928|calm_medsa : 293.0) 0.06 OrthoFinder output from all 47 species
LOC_Os01g59530.1 ACAM-2, CAM5,... Calmodulin-like protein 1 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Mp1g00920.1 ACAM-6, CAM6 Calmodulin-related protein OS=Petunia hybrida... 0.03 OrthoFinder output from all 47 species
Pir_g07505 ACAM-6, CAM6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e009213_P001 ACAM-2, CAM5,... Putative calmodulin-like protein 2 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 13 73
IPR002048 EF_hand_dom 83 146
No external refs found!