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  5. Gb_07923

Gb_07923 (VPS11, ATVPS11)


Aliases : VPS11, ATVPS11

Description : component VPS11 of HOPS/CORVET membrane tethering complexes


Gene families : OG0006628 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006628_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07923

Target Alias Description ECC score Gene Family Method Actions
AT2G05170 VPS11, ATVPS11 vacuolar protein sorting 11 0.05 OrthoFinder output from all 47 species
Ala_g02564 VPS11, ATVPS11 component *(VPS11) of HOPS/CORVET membrane tethering... 0.03 OrthoFinder output from all 47 species
Ceric.13G089700.1 VPS11, ATVPS11,... component *(VPS11) of HOPS/CORVET membrane tethering... 0.06 OrthoFinder output from all 47 species
Dcu_g06475 VPS11, ATVPS11 component *(VPS11) of HOPS/CORVET membrane tethering... 0.07 OrthoFinder output from all 47 species
GSVIVT01030049001 VPS11, ATVPS11 Vesicle trafficking.target membrane... 0.07 OrthoFinder output from all 47 species
Lfl_g11239 VPS11, ATVPS11 component *(VPS11) of HOPS/CORVET membrane tethering... 0.07 OrthoFinder output from all 47 species
MA_20596g0020 VPS11, ATVPS11 component VPS11 of HOPS/CORVET membrane tethering complexes 0.03 OrthoFinder output from all 47 species
Mp3g04110.1 VPS11, ATVPS11 component VPS11 of HOPS/CORVET membrane tethering complexes 0.14 OrthoFinder output from all 47 species
Pir_g13025 VPS11, ATVPS11 component *(VPS11) of HOPS/CORVET membrane tethering... 0.03 OrthoFinder output from all 47 species
Solyc06g065170.4.1 VPS11, ATVPS11,... component VPS11 of HOPS/CORVET membrane tethering complexes 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000547 Clathrin_H-chain/VPS_repeat 327 452
No external refs found!