1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_07133

Gb_07133


Description : Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana (sp|q9m1s3|arp1_arath : 139.0)


Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07133
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00115860 evm_27.TU.AmTr_v1... Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G33470 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 OrthoFinder output from all 47 species
Adi_g055184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016345001 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
MA_10429182g0010 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_1682g0010 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g15828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g049920.4.1 Solyc04g049920 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e001294_P001 Zm00001e001294 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 114 170
No external refs found!