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  5. Gb_06947

Gb_06947


Description : no hits & (original description: none)


Gene families : OG0000491 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06947

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00175790 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00095p00177830 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT4G15120 No alias VQ motif-containing protein 0.03 OrthoFinder output from all 47 species
AT5G65170 No alias VQ motif-containing protein 0.01 OrthoFinder output from all 47 species
Adi_g037220 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g057295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g082777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07759 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g10441 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g04355 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g18181 CAMBP25, ATCAMBP25 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39161.t1 Aspi01Gene39161 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene39169.t1 Aspi01Gene39169 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51314.t1 Aspi01Gene51314 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67465 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G031500.1 Ceric.11G031500 not classified & original description: pacid=50595562... 0.04 OrthoFinder output from all 47 species
Ceric.22G024300.1 Ceric.22G024300 not classified & original description: pacid=50614461... 0.04 OrthoFinder output from all 47 species
Dac_g14608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01303 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g40600 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g04684 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08213 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g11366 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g26126 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g26345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005871001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_37990 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g17050.1 CAMBP25,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g48710.1 LOC_Os07g48710 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g15249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20961 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g57121 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06548 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g36135 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10430864g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_474373g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7989821g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9255g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_935655g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g27462 CAMBP25, ATCAMBP25 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g35494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14853 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g07509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07854 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g44462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45903 CAMBP25, ATCAMBP25 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g11605 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011992 No alias not classified & original description: CDS=1-1437 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016999 No alias not classified & original description: CDS=1-942 0.03 OrthoFinder output from all 47 species
Sam_g26836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g48001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g031990.1.1 Solyc02g031990 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc04g055050.1.1 Solyc04g055050 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g043250.1.1 Solyc07g043250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc10g077130.1.1 Solyc10g077130 Calmodulin-binding protein 25 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc12g057000.1.1 Solyc12g057000 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Spa_g03273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07159 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g24918 CAMBP25, ATCAMBP25 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51416 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g51713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54699 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g55852 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56675 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g07750 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g16817 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g25187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45351 CAMBP25, ATCAMBP25 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e009750_P001 Zm00001e009750 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e013751_P001 Zm00001e013751 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e017385_P001 Zm00001e017385 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e025135_P001 Zm00001e025135 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e030376_P001 Zm00001e030376 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e033973_P001 Zm00001e033973 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035589_P001 Zm00001e035589 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 206 226
No external refs found!