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Gb_06808


Description : Pentatricopeptide repeat-containing protein At3g18020 OS=Arabidopsis thaliana (sp|q9lsk8|pp240_arath : 579.0)


Gene families : OG0018315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0018315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06808

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00213530 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g18020... 0.04 OrthoFinder output from all 47 species
AT3G18020 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
LOC_Os07g47720.1 LOC_Os07g47720 Pentatricopeptide repeat-containing protein At3g18020... 0.05 OrthoFinder output from all 47 species
Solyc03g118790.3.1 Solyc03g118790 Pentatricopeptide repeat-containing protein At3g18020... 0.05 OrthoFinder output from all 47 species
Zm00001e010959_P002 Zm00001e010959 Pentatricopeptide repeat-containing protein At3g18020... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 76 99
IPR002885 Pentatricopeptide_repeat 567 590
IPR002885 Pentatricopeptide_repeat 171 199
IPR002885 Pentatricopeptide_repeat 454 487
IPR002885 Pentatricopeptide_repeat 353 402
IPR002885 Pentatricopeptide_repeat 284 332
IPR002885 Pentatricopeptide_repeat 494 543
IPR002885 Pentatricopeptide_repeat 600 648
IPR002885 Pentatricopeptide_repeat 209 256
No external refs found!