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  5. Gb_06730

Gb_06730


Description : Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp. japonica (sp|k4pw38|rss3_orysj : 145.0)


Gene families : OG0001733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06730
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT1G60060 No alias Serine/threonine-protein kinase WNK (With No Lysine)-related 0.05 OrthoFinder output from all 47 species
Ala_g25235 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09828 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g12381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene51520.t1 Aspi01Gene51520 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G047700.1 Ceric.31G047700 not classified & original description: pacid=50574676... 0.04 OrthoFinder output from all 47 species
Dac_g01426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23707 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g43448 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g31859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06711 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g07585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14642 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os06g12740.1 LOC_Os06g12740 Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
MA_115450g0010 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species
MA_394035g0010 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Msp_g00512 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36805 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63857 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002893 No alias not classified & original description: CDS=719-2329 0.03 OrthoFinder output from all 47 species
Sam_g25625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g078520.3.1 Solyc04g078520 Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Spa_g11635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015792_P001 Zm00001e015792 Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 64 254
No external refs found!