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  5. Gb_06608

Gb_06608 (TIL1, POL2A, ABO4,...)


Aliases : TIL1, POL2A, ABO4, EMB2284, ESD7, EMB142, EMB529

Description : catalytic component POL2/POLE1 of DNA polymerase epsilon complex


Gene families : OG0005358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06608

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00175760 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.13 OrthoFinder output from all 47 species
AMTR_s00040p00177210 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.13 OrthoFinder output from all 47 species
Als_g16530 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.07 OrthoFinder output from all 47 species
Ceric.10G003400.1 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.2 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000970.30 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.02 OrthoFinder output from all 47 species
Cre03.g179961 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.04 OrthoFinder output from all 47 species
Dac_g06701 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.04 OrthoFinder output from all 47 species
Dcu_g42121 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.15 OrthoFinder output from all 47 species
GSVIVT01031365001 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.07 OrthoFinder output from all 47 species
LOC_Os02g30800.1 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.08 OrthoFinder output from all 47 species
Len_g09288 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.1 OrthoFinder output from all 47 species
Lfl_g39596 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.04 OrthoFinder output from all 47 species
MA_10433902g0010 TIL1, POL2A,... DNA polymerase epsilon catalytic subunit A... 0.07 OrthoFinder output from all 47 species
MA_80165g0010 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.08 OrthoFinder output from all 47 species
MA_88369g0010 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.1 OrthoFinder output from all 47 species
Mp3g08150.1 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.01 OrthoFinder output from all 47 species
Nbi_g08627 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.14 OrthoFinder output from all 47 species
Smo442263 TIL1, POL2A,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.02 OrthoFinder output from all 47 species
Spa_g06995 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.1 OrthoFinder output from all 47 species
Tin_g44285 TIL1, POL2A,... catalytic component *(POL2/POLE1) of DNA polymerase... 0.11 OrthoFinder output from all 47 species
Zm00001e014636_P002 TIL1, POL2A,... catalytic component POL2/POLE1 of DNA polymerase epsilon complex 0.18 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR006133 DNA-dir_DNA_pol_B_exonuc 90 419
IPR006134 DNA-dir_DNA_pol_B_multi_dom 616 1086
IPR013697 DNA_pol_e_suA_C 1542 1928
No external refs found!