Gb_06407

Description : transcription factor (DREB)

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_06407

Target	Alias	Description	ECC score	Gene Family Method
AT3G61630	CRF6	cytokinin response factor 6	0.04	OrthoFinder output from all 47 species
AT5G43410	No alias	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
Aspi01Gene54210.t1	Aspi01Gene54210	subgroup ERF-IV/DREB2 transcription factor & original...	0.06	OrthoFinder output from all 47 species
Aspi01Gene65344.t1	Aspi01Gene65344	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene65346.t1	Aspi01Gene65346	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene65347.t1	Aspi01Gene65347	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene65348.t1	Aspi01Gene65348	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene65349.t1	Aspi01Gene65349	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g60740	RAP2.11	transcription factor *(ERN1) & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g09318	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.06	OrthoFinder output from all 47 species
Ehy_g23088	No alias	subgroup ERF-V transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g28249	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01013929001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
LOC_Os12g39330.1	RAP2.11, LOC_Os12g39330	transcription factor (ERF). transcription factor (ERN1)	0.03	OrthoFinder output from all 47 species
MA_3073g0010	WIN1, SHN1	transcription factor (ERF). SHN-type cutin and suberin...	0.08	OrthoFinder output from all 47 species
Pnu_g10709	No alias	subgroup ERF-V transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c5_11150V3.1	Pp3c5_11150	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
Sam_g15306	No alias	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Solyc09g066350.1.1	Solyc09g066350	transcription factor (ERF)	0.04	OrthoFinder output from all 47 species
Zm00001e000125_P001	Zm00001e000125	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
Zm00001e033541_P001	Zm00001e033541	transcription factor (ERF)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	43	91

External Links

No external refs found!

Gb_06407

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation