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  5. Gb_06066

Gb_06066


Description : subunit beta of E1 pyruvate dehydrogenase component


Gene families : OG0003592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003592_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06066
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AT1G30120 PDH-E1 BETA pyruvate dehydrogenase E1 beta 0.12 OrthoFinder output from all 47 species
AT2G34590 No alias Transketolase family protein 0.02 OrthoFinder output from all 47 species
Aop_g08168 No alias subunit beta of E1 subcomplex of pyruvate dehydrogenase... 0.03 OrthoFinder output from all 47 species
Cba_g14291 No alias subunit beta of E1 subcomplex of pyruvate dehydrogenase... 0.03 OrthoFinder output from all 47 species
Ceric.07G030600.1 Ceric.07G030600 subunit beta of E1 subcomplex of pyruvate dehydrogenase... 0.04 OrthoFinder output from all 47 species
Ceric.07G043500.1 Ceric.07G043500 subunit beta of E1 subcomplex of pyruvate dehydrogenase... 0.03 OrthoFinder output from all 47 species
Cre03.g194200 PDH-E1 BETA Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.04 OrthoFinder output from all 47 species
LOC_Os03g44300.1 LOC_Os03g44300 subunit beta of E1 pyruvate dehydrogenase component 0.05 OrthoFinder output from all 47 species
LOC_Os12g42230.1 LOC_Os12g42230 subunit beta of E1 pyruvate dehydrogenase component 0.02 OrthoFinder output from all 47 species
Lfl_g12174 No alias subunit beta of E1 subcomplex of pyruvate dehydrogenase... 0.03 OrthoFinder output from all 47 species
MA_118815g0010 No alias subunit beta of E1 pyruvate dehydrogenase component 0.03 OrthoFinder output from all 47 species
Mp6g00740.1 No alias subunit beta of E1 pyruvate dehydrogenase component 0.07 OrthoFinder output from all 47 species
Msp_g06078 No alias subunit beta of E1 subcomplex of pyruvate dehydrogenase... 0.07 OrthoFinder output from all 47 species
Ore_g03979 No alias subunit beta of E1 subcomplex of pyruvate dehydrogenase... 0.03 OrthoFinder output from all 47 species
Pp3c24_19300V3.1 Pp3c24_19300 Transketolase family protein 0.01 OrthoFinder output from all 47 species
Ppi_g13026 No alias subunit beta of E1 subcomplex of pyruvate dehydrogenase... 0.02 OrthoFinder output from all 47 species
Ppi_g35914 No alias subunit beta of E1 subcomplex of pyruvate dehydrogenase... 0.03 OrthoFinder output from all 47 species
Sam_g19073 No alias subunit beta of E1 subcomplex of pyruvate dehydrogenase... 0.02 OrthoFinder output from all 47 species
Smo153433 No alias Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.03 OrthoFinder output from all 47 species
Smo230614 No alias Lipid metabolism.fatty acid synthesis.acetyl-CoA... 0.02 OrthoFinder output from all 47 species
Solyc04g008590.3.1 Solyc04g008590 subunit beta of E1 pyruvate dehydrogenase component 0.07 OrthoFinder output from all 47 species
Solyc08g016750.3.1 Solyc08g016750 subunit beta of E1 pyruvate dehydrogenase component 0.04 OrthoFinder output from all 47 species
Spa_g12572 No alias subunit beta of E1 subcomplex of pyruvate dehydrogenase... 0.04 OrthoFinder output from all 47 species
Spa_g19238 No alias subunit beta of E1 subcomplex of pyruvate dehydrogenase... 0.02 OrthoFinder output from all 47 species
Zm00001e003250_P002 Zm00001e003250 subunit beta of E1 pyruvate dehydrogenase component 0.07 OrthoFinder output from all 47 species
Zm00001e005013_P001 PDH-E1 BETA,... subunit beta of E1 pyruvate dehydrogenase component 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005475 Transketolase-like_Pyr-bd 92 262
IPR033248 Transketolase_C 278 399
No external refs found!