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  5. Gb_05881

Gb_05881


Description : Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana (sp|q9sxd1|ppr91_arath : 411.0)


Gene families : OG0005897 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005897_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_05881
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
MA_10433091g0010 EMB2279, EMB88 Pentatricopeptide repeat-containing protein At1g62930,... 0.06 OrthoFinder output from all 47 species
MA_105495g0010 No alias Pentatricopeptide repeat-containing protein At5g64320,... 0.05 OrthoFinder output from all 47 species
MA_175359g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_32560g0010 NAC073, ANAC073, SND2 Pentatricopeptide repeat-containing protein At3g22470,... 0.04 OrthoFinder output from all 47 species
MA_435221g0010 No alias Pentatricopeptide repeat-containing protein At5g16640,... 0.1 OrthoFinder output from all 47 species
MA_47344g0010 No alias Pentatricopeptide repeat-containing protein At5g39710... 0.06 OrthoFinder output from all 47 species
MA_68479g0010 No alias Pentatricopeptide repeat-containing protein At1g62910... 0.03 OrthoFinder output from all 47 species
MA_69267g0010 No alias Pentatricopeptide repeat-containing protein At1g63130,... 0.09 OrthoFinder output from all 47 species
MA_78481g0010 No alias Pentatricopeptide repeat-containing protein At1g63130,... 0.09 OrthoFinder output from all 47 species
MA_914400g0010 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.15 OrthoFinder output from all 47 species
MA_9542585g0010 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.05 OrthoFinder output from all 47 species
MA_959553g0010 No alias Pentatricopeptide repeat-containing protein At1g62910... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 111 138
IPR002885 Pentatricopeptide_repeat 78 103
IPR002885 Pentatricopeptide_repeat 177 226
IPR002885 Pentatricopeptide_repeat 247 296
IPR002885 Pentatricopeptide_repeat 352 401
IPR002885 Pentatricopeptide_repeat 527 576
IPR002885 Pentatricopeptide_repeat 597 646
IPR002885 Pentatricopeptide_repeat 423 471
IPR002885 Pentatricopeptide_repeat 489 520
IPR002885 Pentatricopeptide_repeat 140 170
IPR002885 Pentatricopeptide_repeat 313 345
No external refs found!