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  5. Gb_04858

Gb_04858 (ATPREP1, PREP1, ATZNMP)


Aliases : ATPREP1, PREP1, ATZNMP

Description : targeting peptid degrading peptidase (PreP)


Gene families : OG0002258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002258_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04858

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00013900 ATPREP1, PREP1,... Protein modification.peptide... 0.04 OrthoFinder output from all 47 species
Adi_g058434 ATPREP1, PREP1, ATZNMP targeting peptid degrAding peptidase *(PreP) & original... 0.05 OrthoFinder output from all 47 species
Aop_g07776 ATPREP1, PREP1, ATZNMP targeting peptid degrading peptidase *(PreP) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00260.t1 ATPREP1, PREP1,... targeting peptid degrading peptidase *(PreP) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009452 ATPREP1, PREP1, ATZNMP targeting peptid degrading peptidase *(PreP) & original... 0.04 OrthoFinder output from all 47 species
Cba_g12371 ATPREP1, PREP1, ATZNMP targeting peptid degrading peptidase *(PreP) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001085.21 ATPREP1, PREP1, ATZNMP Presequence protease 1, chloroplastic/mitochondrial... 0.01 OrthoFinder output from all 47 species
Dac_g14527 ATPREP1, PREP1, ATZNMP targeting peptid degrading peptidase *(PreP) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g06505 ATPREP1, PREP1, ATZNMP targeting peptid degrading peptidase *(PreP) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g04039 ATPREP1, PREP1, ATZNMP targeting peptid degrading peptidase *(PreP) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01031766001 ATPREP2, PREP2 Protein modification.peptide... 0.05 OrthoFinder output from all 47 species
Len_g11705 ATPREP1, PREP1, ATZNMP targeting peptid degrading peptidase *(PreP) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g02361 ATPREP1, PREP1, ATZNMP targeting peptid degrading peptidase *(PreP) & original... 0.05 OrthoFinder output from all 47 species
MA_10436583g0010 ATPREP2, PREP2 targeting peptid degrading peptidase (PreP) 0.02 OrthoFinder output from all 47 species
MA_502125g0010 ATPREP2, PREP2 targeting peptid degrading peptidase (PreP) 0.04 OrthoFinder output from all 47 species
Msp_g15332 ATPREP1, PREP1, ATZNMP targeting peptid degrading peptidase *(PreP) & original... 0.05 OrthoFinder output from all 47 species
Nbi_g03182 ATPREP1, PREP1, ATZNMP targeting peptid degrading peptidase *(PreP) & original... 0.04 OrthoFinder output from all 47 species
Pir_g13616 ATPREP1, PREP1, ATZNMP targeting peptid degrading peptidase *(PreP) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g13440 ATPREP1, PREP1, ATZNMP targeting peptid degrading peptidase *(PreP) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g15069 ATPREP1, PREP1, ATZNMP targeting peptid degrading peptidase *(PreP) & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000341 ATPREP1, PREP1, ATZNMP targeting peptid degrading peptidase *(PreP) & original... 0.03 OrthoFinder output from all 47 species
Sam_g16163 No alias targeting peptid degrading peptidase *(PreP) & original... 0.03 OrthoFinder output from all 47 species
Sam_g24462 No alias targeting peptid degrading peptidase *(PreP) & original... 0.03 OrthoFinder output from all 47 species
Solyc01g108600.3.1 ATPREP1, PREP1,... targeting peptid degrading peptidase (PreP) 0.03 OrthoFinder output from all 47 species
Spa_g18570 ATPREP1, PREP1, ATZNMP targeting peptid degrading peptidase *(PreP) & original... 0.02 OrthoFinder output from all 47 species
Tin_g03524 ATPREP1, PREP1, ATZNMP targeTing peptid degrading peptidase *(PreP) & original... 0.07 OrthoFinder output from all 47 species
Zm00001e015926_P001 ATPREP1, PREP1,... targeting peptid degrading peptidase (PreP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007863 Peptidase_M16_C 4 157
IPR013578 Peptidase_M16C_assoc 235 484
No external refs found!