- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 317.0)
Gene families : OG0000012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_04812 | |
| Cluster | HCCA: Cluster_19 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g009271 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g009827 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g042533 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g052366 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g077689 | ORF240B | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g086687 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g17123 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g22408 | ORF240B | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g28521 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g29699 | ORF240B | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g30607 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g30763 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g33924 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g33984 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g34058 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g34233 | ORF240B | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g34234 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g38899 | ORF240B | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g39060 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g39705 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g39782 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g42198 | CRK8 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g43120 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g44146 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g44683 | ORF240B | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g48805 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g49602 | CRK8 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g15573 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g56525 | CRK8 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g22252 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g27112 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g65144 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene02399.t1 | CRK8, Aspi01Gene02399 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene55557.t1 | Aspi01Gene55557 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g05887 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g35915 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g41715 | CRK8 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g24748 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g24750 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g28737 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g31531 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_02142 | ORF170 | Retrovirus-related Pol polyprotein from transposon RE2... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_03159 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_03166 | CRK8 | Retrovirus-related Pol polyprotein from transposon RE2... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_04117 | ORF240B | Retrovirus-related Pol polyprotein from transposon RE1... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_04745 | CRK8 | Retrovirus-related Pol polyprotein from transposon RE2... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_04911 | CRK8 | Retrovirus-related Pol polyprotein from transposon RE2... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_05895 | CRK8 | Retrovirus-related Pol polyprotein from transposon RE1... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_05914 | CRK8 | Retrovirus-related Pol polyprotein from transposon RE2... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_07539 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_12566 | CRK8 | Retrovirus-related Pol polyprotein from transposon RE2... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_13694 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_15750 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_17559 | CRK8 | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_17709 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_18114 | ORF240B | Retrovirus-related Pol polyprotein from transposon RE1... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_18380 | ORF170 | Retrovirus-related Pol polyprotein from transposon RE1... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_19106 | CRK8 | Retrovirus-related Pol polyprotein from transposon TNT... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_19530 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_24315 | CRK8 | Retrovirus-related Pol polyprotein from transposon RE1... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_26000 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.09 | OrthoFinder output from all 47 species | |
| Gb_28245 | CRK8 | Retrovirus-related Pol polyprotein from transposon TNT... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_39693 | ORF240B | Retrovirus-related Pol polyprotein from transposon RE1... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g18954 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g29156 | ORF240B | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g36111 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g36549 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g41084 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g11267 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g25687 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g44726 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g02332 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g15913 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g17484 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g19097 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g22833 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g25314 | ORF240B | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g26440 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g29978 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g31866 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g32772 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g33597 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c16_24400V3.1 | Pp3c16_24400 | No annotation | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c20_19290V3.1 | Pp3c20_19290 | No annotation | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c6_28960V3.1 | Pp3c6_28960 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c7_3400V3.1 | Pp3c7_3400 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g27543 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g32160 | CRK8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g45447 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0015074 | DNA integration | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |