Heatmap: Cluster_19 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
-0.67 -0.62 -1.35 2.16 -1.52 -2.0 -0.64 -0.09 -1.12 -1.28 -0.49 - -0.4 -0.38 0.48 2.15 -0.88 - 0.42 -0.25
0.8 -0.66 -0.8 1.51 - -1.58 - 0.16 -0.46 -0.88 0.13 -2.74 -2.9 -0.97 0.96 1.91 -0.76 - 1.21 -0.02
0.37 -0.96 -1.55 1.5 -1.97 -1.5 -1.17 0.09 -0.23 0.04 0.31 -5.82 0.41 -0.27 -0.86 1.45 -0.42 -0.9 1.46 -1.76
0.07 -0.83 -1.58 2.18 -0.86 -2.16 -2.09 -0.27 -1.67 -1.62 -0.58 -5.94 0.49 -0.17 -0.31 1.19 -0.11 -2.49 1.86 -2.08
0.23 -0.26 -0.8 2.06 -1.27 -0.8 -3.35 -0.44 -1.62 -1.04 0.5 -3.78 -1.44 -2.2 -0.18 1.13 -0.2 -2.49 1.69 0.24
Gb_01199 (CRK8)
- - - - 1.19 - 0.8 0.1 -0.16 - 1.58 - -0.4 - - 2.02 - 1.55 1.72 -
Gb_01434 (ORF240B)
0.33 - - 2.29 - - -2.37 -0.19 0.12 -1.27 0.94 - -2.14 -3.15 0.79 0.26 - - 2.22 0.52
0.46 - -0.05 0.12 -0.33 -1.52 -1.49 -1.13 0.37 0.13 0.87 - -0.58 -2.09 -0.85 1.75 - -1.76 1.27 1.51
-0.78 - - 2.06 -1.38 -2.36 -1.28 -0.73 -0.71 -1.42 - -3.53 0.91 0.35 1.23 0.82 0.76 - 1.68 -1.32
-0.2 -0.37 -0.73 1.91 -1.99 -2.87 -1.38 -0.03 -0.7 -1.05 -0.14 -2.59 0.19 -0.44 0.17 1.51 -0.07 -1.21 1.16 -0.78
0.5 - -1.58 - -2.54 - -0.65 0.42 -0.36 -0.54 0.2 -1.95 0.13 0.4 0.09 1.99 1.26 - 1.4 -0.39
Gb_02905 (ORF170)
0.72 - - 0.55 -0.9 -1.24 -1.39 0.17 -0.04 -0.89 1.56 - -0.53 -1.74 0.66 0.65 1.0 -1.45 1.36 -0.16
0.0 -0.96 -0.26 2.37 -2.33 - -1.05 0.49 -2.38 -0.5 0.64 -4.47 -2.53 -1.33 0.43 0.52 -0.57 -0.77 1.61 -2.33
Gb_03950 (ORF240B)
1.35 - - 0.93 0.73 - -1.76 0.02 -1.31 - 0.01 -2.77 - -1.31 1.13 0.72 - - 2.77 -
0.32 -1.0 -3.17 1.79 -0.89 -1.63 -1.37 -0.21 -0.94 -2.66 -1.13 -3.81 0.73 0.13 -0.52 1.83 -0.51 -1.37 1.48 -1.16
-0.64 - -1.4 1.82 -1.69 -1.22 -0.97 -0.17 -1.53 -0.81 -0.53 - -1.43 -1.41 -0.83 2.06 0.82 -0.33 1.41 -0.01
0.18 - - 2.73 -1.05 - -0.69 -0.9 -1.6 -1.96 -1.06 - -1.18 -0.0 0.36 - -0.65 - 1.94 1.2
Gb_06720 (ORF170)
0.47 - -0.65 2.1 0.08 - -1.59 -0.38 -0.76 -0.89 0.46 -3.18 0.17 0.88 -0.1 0.06 -2.13 -0.72 1.64 -
Gb_06760 (CRK8)
-0.35 -0.04 -2.6 2.57 0.14 - -3.2 -0.78 -0.59 -1.23 -2.62 - -1.28 -1.66 -0.26 0.66 -0.61 0.4 1.64 -0.22
-0.09 - -2.79 2.05 -0.59 - -2.42 -0.38 -3.1 -1.44 -0.51 - 0.7 0.37 - 1.4 1.6 -0.9 1.51 -
-1.39 - -0.41 1.4 0.89 - - -0.88 -2.75 - - - 0.39 -1.88 - 1.83 -0.18 - 2.65 0.47
-1.89 0.28 -0.89 2.84 - - - -0.53 -1.45 - -0.42 - 0.16 -0.48 -0.8 1.71 -0.07 - 1.26 -
-0.09 -1.28 -0.85 2.38 -1.02 -2.98 -2.6 -0.49 -0.89 -1.49 -1.02 -4.79 0.07 -0.34 -0.78 1.29 -0.36 -2.11 1.95 -2.12
0.11 -1.56 -0.51 1.56 -0.86 -4.11 -0.22 0.1 -0.95 -1.3 0.29 -3.19 -0.12 -0.56 0.08 1.41 0.03 -4.36 1.66 -0.7
0.35 - -15.31 2.21 - - -1.44 0.25 -0.43 -1.42 -18.13 -2.79 -2.23 - 1.28 1.63 -0.35 - 1.89 0.07
-0.27 -1.1 -2.2 0.39 -3.16 -1.44 -0.98 -0.0 -0.28 -0.01 0.5 -2.43 -1.03 -1.69 1.31 1.27 0.96 -0.83 1.23 0.3
Gb_10082 (ORF170)
0.68 -1.41 -2.07 1.42 -0.23 -0.8 -1.65 -0.06 -2.1 -0.2 0.07 -4.55 -1.68 -0.7 0.1 1.44 -1.43 -1.76 1.3 1.24
-0.33 -1.53 -1.2 1.92 -2.15 -1.05 -2.05 -0.53 -0.34 -1.57 1.1 -3.48 0.15 -0.65 0.91 1.45 -1.02 -2.18 1.01 -0.88
-0.05 - - - - - -1.46 0.17 -1.52 -2.45 1.62 - -0.06 -0.22 2.04 1.33 0.54 -2.22 1.86 -2.38
-1.18 - -3.6 2.66 -1.34 -1.07 -2.39 -1.41 -3.82 -1.49 -0.65 - -0.26 -1.2 -1.36 -0.38 -1.56 -3.67 2.96 -
0.52 -1.6 -1.36 1.99 -0.84 -1.57 -1.07 -0.35 -1.14 -1.1 -0.92 -5.91 0.22 -0.18 -0.57 1.57 -0.58 -1.57 1.62 -1.04
-0.09 0.75 -1.54 2.12 -0.36 -1.34 -1.19 -0.29 -0.7 -1.25 -2.1 -3.53 0.33 -0.22 -1.2 1.54 -0.54 -16.8 0.99 -0.4
0.13 - - 1.3 - -0.67 - -0.3 -2.23 -1.69 -0.07 - -2.26 -5.44 0.71 2.06 - 0.66 2.0 0.94
0.49 -1.04 -0.73 0.82 0.38 -0.19 -0.4 -0.28 -0.57 -1.07 0.66 -2.95 -1.72 -1.11 0.27 1.02 -0.49 -0.38 1.67 -1.1
Gb_14538 (CRK8)
-0.03 -0.06 -2.31 1.44 - - -2.42 -0.39 -1.21 -1.56 -0.67 - - -1.8 1.18 1.24 -0.16 -0.13 2.43 -0.58
0.05 0.11 -1.64 1.05 - -0.71 -2.17 0.1 -1.65 -1.27 -0.48 -2.36 -1.2 -1.1 0.42 2.06 0.69 - 1.82 -1.33
0.04 -0.78 -1.92 2.36 0.42 - -0.48 -0.1 -1.29 -1.27 -0.53 -4.0 -1.11 -1.83 -2.09 0.86 -0.99 - 1.6 1.07
0.3 -0.15 -1.64 1.99 -1.33 -1.34 -2.09 0.2 -0.44 -0.68 -1.29 -3.13 0.41 -0.94 -0.97 1.35 -0.29 -1.41 1.59 -1.31
- - - 2.47 - - -1.62 -0.24 -3.66 -1.77 - -3.98 - - 0.1 2.43 -0.04 -1.7 2.35 -
0.06 -0.14 -2.28 1.86 -2.52 -2.37 -1.54 -0.17 -1.29 -1.2 -0.03 -3.27 0.2 -0.06 0.57 1.6 0.12 -1.58 1.23 -1.73
- - - - - - - - - - - - - - - - - - 4.32 -
0.0 - - 2.24 -0.88 - -1.56 -0.65 -0.95 - - - -1.2 -0.42 0.9 1.13 1.04 0.15 1.44 0.19
- - - 2.32 - - - -0.08 -2.62 -0.86 0.96 - -1.9 -0.97 0.68 1.2 - - 2.75 -
Gb_18988 (CRK8)
0.09 -2.91 -1.76 1.95 -0.12 -2.88 -1.52 -0.1 -1.2 -0.8 0.4 -4.0 0.2 -0.07 -0.23 1.47 0.02 -2.58 1.26 -0.67
Gb_18989 (CRK8)
0.51 -0.46 -0.95 1.53 -1.03 -1.37 -0.93 -0.26 -1.09 -1.16 0.45 -3.72 -1.91 -1.27 0.33 1.64 -1.0 -0.87 1.43 0.09
-0.24 - - 2.56 -2.33 -2.19 -3.21 -0.24 -1.35 -1.25 0.9 -2.83 -0.59 -0.76 -0.12 0.9 -1.98 -0.81 1.33 0.75
-0.49 - - 2.33 -0.37 -1.41 -1.08 -0.01 0.8 - 0.48 - -0.69 0.06 0.21 0.13 - - 2.03 -0.98
-0.4 -0.41 - 1.33 -1.78 -0.67 -0.19 -0.0 -0.78 -0.25 0.35 - -0.78 -2.82 0.96 1.62 -0.07 -0.96 1.35 -0.48
0.99 1.38 0.1 -0.17 -1.8 - -2.35 0.25 -1.94 -1.07 0.08 -2.83 -0.71 -2.7 0.61 1.77 -0.98 0.15 1.12 -1.46
-1.52 - -0.1 2.73 -1.56 0.36 -0.77 -0.62 - - - - -1.12 -1.39 -0.4 1.64 -1.37 -2.07 1.39 0.3
- 0.37 - 2.47 - - -2.65 -0.47 -0.88 -1.51 -0.31 -2.58 0.85 0.4 -0.88 1.88 0.7 - 0.54 -
-0.02 0.14 -4.99 2.25 -2.75 -1.99 -0.43 0.02 -1.05 -1.18 -1.04 -3.46 0.46 0.54 -0.03 1.48 -0.5 -3.42 0.64 -0.92
Gb_21357 (CRK8)
0.61 -1.29 -2.74 2.17 -2.29 - -2.83 -0.43 -1.47 -1.16 -1.92 - -0.99 -1.26 -2.19 1.6 -0.17 -0.42 2.28 -0.77
0.26 -0.24 -1.05 2.0 -1.3 -2.09 -1.38 -0.34 -1.14 -1.04 -0.43 -4.32 -0.03 -0.5 -0.62 2.05 -0.46 -2.71 1.16 -1.6
0.03 0.93 -3.25 2.3 -1.64 -3.13 -0.89 0.18 -0.81 -0.85 0.3 -5.05 -1.66 -1.78 0.86 0.78 -2.88 -0.82 1.03 -0.55
- - -1.61 2.09 -1.04 - -2.56 0.6 -1.68 -2.6 1.15 -1.89 - - -0.17 0.52 -0.09 -1.97 2.68 -1.41
Gb_23452 (CRK8)
0.74 -0.42 - 1.55 -0.95 -3.38 -1.72 -0.01 -0.94 -1.03 -0.24 -3.96 -3.17 -1.33 0.55 1.58 0.01 -1.36 1.7 0.25
-0.04 - - 1.26 - - -0.14 -0.14 -2.07 -0.62 0.34 -3.22 - 0.05 0.16 2.4 -1.9 0.01 1.71 -0.78
0.16 -0.39 - 2.17 -1.42 -1.35 -1.3 -0.32 -3.0 -1.34 -2.57 -3.33 -1.41 -1.97 -0.08 -0.02 0.67 -1.01 2.64 -
0.25 - - 1.53 -0.81 -1.24 -0.43 0.48 -1.13 -0.57 -0.76 - -1.37 -1.87 0.35 1.2 0.14 - 1.91 1.0
-0.68 - - 3.08 - - -1.25 -1.16 - -3.11 - - -1.9 -1.35 -0.67 -0.54 0.06 -2.61 2.76 -
-0.07 - -2.2 1.74 -2.19 - -1.07 -0.18 -1.11 -1.1 -0.81 - -0.23 -0.36 0.05 1.88 0.85 -0.95 1.91 -
-0.79 - - 1.81 0.63 - -1.48 -0.5 -0.84 -2.44 -1.26 - -0.04 0.35 -0.76 2.23 - -0.65 1.75 -0.68
Gb_25861 (ORF240B)
0.14 -0.83 -1.14 0.73 -0.47 -2.35 -1.1 0.19 -1.01 0.17 0.29 -2.83 -0.24 0.23 0.1 0.69 -0.23 -2.12 1.75 0.65
-0.73 - -0.8 1.17 -1.03 -0.99 -0.38 -0.11 -0.12 -1.39 0.09 -3.97 - -1.07 0.2 2.11 0.1 -0.64 1.65 -0.59
0.37 -1.14 -1.68 1.99 -1.27 -3.61 -1.52 -0.34 -0.94 -0.64 -0.91 -4.16 0.18 -0.4 -0.2 1.53 -0.44 -2.72 1.91 -1.78
0.07 -1.28 -1.25 2.28 -1.08 -2.26 -2.04 -0.27 -1.08 -1.06 -0.97 -4.75 0.36 0.12 -0.78 1.37 -0.15 -1.7 1.63 -2.5
0.57 -1.01 -2.15 2.8 -1.66 -2.02 -3.88 -0.55 -1.56 -4.08 -1.26 -18.1 -0.98 -0.29 0.25 1.58 -2.27 -2.52 1.2 -0.9
-0.36 -0.68 -3.01 1.64 -2.24 -2.23 -3.09 -0.09 -1.59 -1.78 -1.12 -2.77 0.43 -0.09 -0.11 2.23 -1.76 -2.02 1.74 -0.24
Gb_29132 (ORF170)
0.22 -0.63 -3.66 1.98 -0.73 -3.04 -1.53 -0.15 -0.79 -0.78 0.38 -4.38 -1.71 -1.2 0.25 0.63 -1.05 -0.2 1.89 0.22
0.22 - - 1.68 - 1.46 0.1 -0.21 - -0.02 0.9 -2.3 -0.41 - - - - 1.42 2.16 -
0.78 0.42 -0.84 1.65 -0.75 -3.71 -1.88 -0.4 -1.32 -0.95 -0.35 -3.79 -0.11 -0.95 0.62 0.88 0.38 -1.52 1.22 -0.03
-0.22 -0.32 - 2.54 -1.3 - -2.35 -0.4 -2.31 -1.61 0.29 -2.9 -2.94 -0.72 0.01 0.91 -0.75 -2.69 1.97 0.01
Gb_30815 (ORF111A)
-0.88 - - 1.42 - - -0.49 0.28 -0.6 -1.75 0.67 - - -2.4 -0.79 2.02 -0.78 -2.08 2.2 1.06
0.69 - - 2.35 0.12 - -2.24 -0.97 -1.11 -2.17 -0.11 - 0.02 -1.46 0.19 2.05 -0.3 - 1.27 -
Gb_31779 (ORF111A)
1.14 - - - - - -0.98 0.09 0.55 -1.14 -0.24 -2.03 -1.03 0.37 1.58 1.5 -0.38 -1.55 2.17 -
0.18 - -1.9 1.53 - - -1.59 0.0 -0.48 -0.21 0.11 - -0.48 0.12 -1.54 2.18 -0.65 -2.94 1.96 -1.4
Gb_32590 (ORF240B)
-0.19 - -2.56 2.53 -0.91 -1.22 -3.26 -0.85 -3.2 -3.41 -1.89 -4.53 -2.95 -3.04 1.15 0.85 -0.44 - 2.22 0.45
-0.25 0.19 0.03 2.31 0.19 0.37 -0.18 0.14 -0.19 -1.82 -0.75 - -2.24 -0.36 -1.09 -0.61 -0.13 - 1.27 -1.23
Gb_33153 (ORF240B)
-0.95 -0.48 -0.53 1.79 - -1.89 -0.35 0.15 -0.43 -1.07 -0.03 - -0.33 -0.35 0.31 1.15 -1.43 -1.9 1.92 -0.35
-0.08 - - 1.45 -0.51 - -0.32 -0.28 0.29 -1.17 -0.82 -2.52 -0.47 -0.26 -1.63 2.08 - 0.31 1.94 -1.31
0.71 0.3 -2.56 1.83 -0.4 - -1.16 0.11 -1.53 -3.22 -2.66 -2.7 0.89 -0.07 -0.3 1.15 - 0.17 1.46 -0.67
-0.02 1.07 - - - - 0.92 -0.27 0.58 - 0.38 - - -1.49 - 0.6 1.4 0.89 2.33 -
0.14 1.43 -0.93 2.22 -0.55 - -2.02 -0.01 -0.7 -0.98 -0.35 -2.93 -0.05 -1.07 -0.84 1.35 -1.11 - 0.81 -1.7
-2.33 - - 0.31 - 2.55 -2.77 -0.85 -1.73 -0.62 0.67 -3.2 -3.66 -2.82 1.87 -0.35 -0.87 - 1.55 0.26
-0.44 -1.41 -1.79 1.88 -0.45 -3.25 -1.41 -0.21 -1.12 -1.83 -1.42 -4.65 0.2 -0.07 -0.76 1.66 -0.38 -2.57 2.12 -0.86
Gb_34479 (ORF240B)
0.39 -0.64 - 2.0 -0.3 -1.45 0.78 0.21 -1.99 -2.59 -1.64 -3.34 -0.23 -1.18 0.34 1.83 - - 1.46 -1.82
Gb_34971 (ORF170)
-0.02 - - 3.21 - - - -0.2 - -2.01 -0.58 -4.01 -0.8 -2.35 -1.23 1.53 - - 1.84 -2.16
0.1 - -0.55 1.64 - - - 0.32 -0.79 -1.36 - - - - - 1.15 1.44 - 2.1 1.88
0.75 - - 1.29 -0.76 - 0.55 -0.1 -0.23 -0.62 -0.61 -3.68 -1.27 -1.18 0.71 1.36 0.12 -0.67 1.68 -0.56
0.33 -1.02 -2.09 2.08 -1.66 -3.43 -1.29 0.16 -0.61 -0.65 -2.24 -4.64 0.55 0.09 0.01 1.98 -0.17 -1.5 0.53 -2.92
0.42 - 0.49 1.39 0.83 - -1.84 0.47 0.12 -0.3 -2.36 - -0.06 -0.39 - 1.3 0.18 - 1.92 -
Gb_36823 (CRK8)
0.98 - 0.16 2.51 -0.97 -1.18 -0.88 0.36 0.07 -0.48 -1.53 - -2.72 -1.05 -1.74 -1.17 0.47 - 1.53 -0.6
-0.97 -0.92 -2.1 1.47 -1.02 -0.12 -1.15 -0.2 -0.66 -1.61 0.07 -2.35 -0.97 -0.39 0.71 1.61 -0.89 -1.2 1.85 -1.13
0.21 - -2.08 1.0 - -2.05 -0.13 0.19 -0.26 0.46 0.42 -2.71 -0.95 -2.06 1.21 1.69 -2.2 -1.0 1.15 0.48
0.18 -0.78 -0.21 2.47 -1.42 -2.47 -1.21 -0.58 -0.56 -1.87 -1.43 -4.08 -0.04 -4.52 -0.46 0.05 0.36 - 1.72 0.58
1.61 - -0.15 1.12 -15.29 1.28 0.64 -0.41 -1.32 -0.02 -0.22 -3.18 -0.6 -1.06 -17.08 0.51 - -0.33 1.77 -
Gb_38369 (CRK8)
0.53 -1.2 -1.61 1.21 -1.53 -1.99 -0.91 -0.15 -0.69 -0.71 0.24 -3.46 -0.55 -0.66 0.22 1.91 -0.43 -0.99 1.4 -0.27
Gb_38490 (ORF120)
-0.54 - -3.18 1.17 -1.48 - 0.1 0.12 -0.7 -1.78 0.35 -3.8 -0.52 0.21 1.15 0.99 -0.21 -1.54 2.06 -0.44
0.76 - -1.61 3.0 -0.96 - - -0.21 -3.22 - -1.19 - -0.55 - - 0.5 0.69 -0.29 1.74 -2.6
0.27 0.48 - 2.6 0.06 - -0.45 -0.38 -1.68 -1.5 0.6 - - - - 0.6 - -1.73 2.26 -
-0.72 - 0.28 1.95 - -1.34 -2.89 0.03 -0.29 0.36 -1.85 -2.84 0.49 0.22 -0.16 1.68 -1.36 -0.62 1.23 -2.28
-2.05 -0.84 - 2.78 -0.89 - - -1.06 -2.56 -2.81 0.43 -3.09 -0.32 0.07 -3.08 1.02 -1.11 - 2.35 -
0.49 - -2.11 1.84 0.77 -2.39 -2.17 -0.14 -1.51 -1.04 -0.32 -4.4 -0.17 -0.96 -0.66 0.73 0.51 -1.51 1.7 0.45
0.38 - -1.21 2.19 -1.74 - - -0.4 -1.78 -1.71 -0.2 - -2.16 - -0.02 1.82 - 0.52 1.51 1.11
0.6 - - 2.33 - - -0.91 0.08 -23.53 - 0.86 - -1.13 -1.38 -1.26 1.62 1.02 - 1.88 -
-0.37 -1.54 -2.37 1.85 -1.66 -0.76 -1.17 -0.19 -0.83 -0.54 0.05 -4.19 0.55 -0.69 0.03 1.64 0.25 -1.76 1.19 -0.96
Gb_41665 (ORF170)
0.12 - -0.87 2.15 0.17 -2.14 -1.95 -0.43 -1.92 -2.91 0.54 -4.22 -1.3 -1.25 -0.14 1.36 -0.97 -1.28 1.82 -0.15
Gb_41711 (ORF170)
0.97 -1.86 -2.25 1.15 -1.84 -0.73 -1.31 0.09 -0.14 -0.71 -1.3 -2.54 0.08 -0.16 0.28 1.29 -0.39 -0.52 1.66 -0.63
0.53 1.27 -1.62 1.3 -0.21 -2.36 -0.71 0.1 -0.36 0.17 -0.29 -3.67 -3.05 -1.07 -0.32 0.92 0.45 -0.74 1.17 -1.76

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.