1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_04800

Gb_04800 (AMY2, ATAMY2)


Aliases : AMY2, ATAMY2

Description : alpha amylase


Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04800
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Adi_g021932 AMY3, ATAMY3 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031740001 AMY1, ATAMY1 Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
Gb_30449 AMY1, ATAMY1 alpha amylase 0.01 OrthoFinder output from all 47 species
LOC_Os09g28400.1 AMY1, ATAMY1,... alpha amylase 0.03 OrthoFinder output from all 47 species
Len_g16715 AMY1, ATAMY1 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g24732 AMY1, ATAMY1 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g22120.1 AMY2, ATAMY2 alpha amylase 0.02 OrthoFinder output from all 47 species
Solyc05g007070.2.1 AMY3, ATAMY3,... alpha amylase 0.02 OrthoFinder output from all 47 species
Zm00001e009946_P001 AMY1, ATAMY1,... alpha amylase 0.04 OrthoFinder output from all 47 species
Zm00001e015947_P002 AMY1, ATAMY1,... alpha amylase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!