Aliases : ATDEF1, PDF1A
Description : formylmethionine deformylase (PDF)
Gene families : OG0007852 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007852_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_04790 | |
Cluster | HCCA: Cluster_34 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aop_g19861 | ATDEF1, PDF1A | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0049.g030700 | ATDEF1, PDF1A | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g03309 | ATDEF1, PDF1A | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01017280001 | ATDEF1, PDF1A | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g37510.1 | ATDEF1, PDF1A,... | formylmethionine deformylase (PDF) | 0.06 | OrthoFinder output from all 47 species | |
MA_395770g0010 | ATDEF1, PDF1A | formylmethionine deformylase (PDF) | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0001.g000710 | ATDEF1, PDF1A | EC_3.5 hydrolase acting on carbon-nitrogen bond, other... | 0.02 | OrthoFinder output from all 47 species | |
Solyc07g015860.3.1 | ATDEF1, PDF1A,... | formylmethionine deformylase (PDF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e035712_P002 | ATDEF1, PDF1A,... | formylmethionine deformylase (PDF) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004784 | superoxide dismutase activity | IEP | HCCA |
MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
MF | GO:0016209 | antioxidant activity | IEP | HCCA |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR023635 | Peptide_deformylase | 108 | 272 |
No external refs found! |