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  5. Gb_04708

Gb_04708 (OPCL1)


Aliases : OPCL1

Description : 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana (sp|q84p21|4cll5_arath : 313.0)


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04708
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00239750 OPCL1,... Phytohormones.jasmonic acid.synthesis.OPC-8:CoA synthetase 0.03 OrthoFinder output from all 47 species
AMTR_s00048p00141400 evm_27.TU.AmTr_v1... 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G20510 OPCL1 OPC-8:0 CoA ligase1 0.02 OrthoFinder output from all 47 species
AT5G38120 4CL8 AMP-dependent synthetase and ligase family protein 0.04 OrthoFinder output from all 47 species
Adi_g012372 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g45907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G005800.1 OPCL1, Ceric.25G005800 not classified & original description: pacid=50594129... 0.03 OrthoFinder output from all 47 species
Dac_g07176 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37756 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g04000.1 OPCL1, LOC_Os03g04000 OPC-8:CoA synthetase 0.04 OrthoFinder output from all 47 species
MA_10426784g0010 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g52029 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo177466 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo231716 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Tin_g07385 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 50 402
No external refs found!