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  5. Gb_04706

Gb_04706 (OPCL1)


Aliases : OPCL1

Description : 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana (sp|q84p21|4cll5_arath : 240.0)


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04706
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AT5G38120 4CL8 AMP-dependent synthetase and ligase family protein 0.04 OrthoFinder output from all 47 species
Adi_g012372 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015908 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30549 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_18695 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc03g111170.3.1 Solyc03g111170 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc11g007970.2.1 OPCL1, Solyc11g007970 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g07385 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46255 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e032697_P002 Zm00001e032697 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 21 310
No external refs found!