Aliases : CCB3, atylmg3, YLMG3
Description : assembly factor CCB3 of CCB cytochrome b6 maturation system (system IV)
Gene families : OG0006561 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006561_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_04602 | |
Cluster | HCCA: Cluster_88 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g00510 | CCB3, atylmg3, YLMG3 | assembly factor CCB3 of CCB cytochrome b6 maturation... | 0.04 | OrthoFinder output from all 47 species | |
Cre01.g052400 | No alias | Photosynthesis.photophosphorylation.cytochrome b6/f... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g02417 | CCB3, atylmg3, YLMG3 | assembly factor CCB3 of CCB cytochrome b6 maturation... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01010180001 | CCB3, atylmg3, YLMG3 | Photosynthesis.photophosphorylation.cytochrome b6/f... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os01g73540.1 | CCB3, atylmg3,... | assembly factor CCB3 of CCB cytochrome b6 maturation... | 0.05 | OrthoFinder output from all 47 species | |
Msp_g29461 | CCB3, atylmg3, YLMG3 | assembly factor CCB3 of CCB cytochrome b6 maturation... | 0.06 | OrthoFinder output from all 47 species | |
Nbi_g04659 | CCB3, atylmg3, YLMG3 | assembly factor CCB3 of CCB cytochrome b6 maturation... | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g021000.3.1 | CCB3, atylmg3,... | assembly factor CCB3 of CCB cytochrome b6 maturation... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g17120 | CCB3, atylmg3, YLMG3 | assembly factor CCB3 of CCB cytochrome b6 maturation... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e028271_P001 | CCB3, atylmg3,... | assembly factor CCB3 of CCB cytochrome b6 maturation... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0016020 | membrane | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0015994 | chlorophyll metabolic process | IEP | HCCA |
BP | GO:0015995 | chlorophyll biosynthetic process | IEP | HCCA |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0042440 | pigment metabolic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0046148 | pigment biosynthetic process | IEP | HCCA |
MF | GO:0046406 | magnesium protoporphyrin IX methyltransferase activity | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003425 | CCB3/YggT | 164 | 232 |
No external refs found! |