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  5. Gb_04470

Gb_04470


Description : no hits & (original description: none)


Gene families : OG0003264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04470
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00042p00185900 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00141p00085330 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00141p00087130 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00141p00087190 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00141p00103540 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT1G29980 No alias Protein of unknown function, DUF642 0.03 OrthoFinder output from all 47 species
AT2G41800 No alias Protein of unknown function, DUF642 0.03 OrthoFinder output from all 47 species
AT5G11420 No alias Protein of unknown function, DUF642 0.03 OrthoFinder output from all 47 species
Gb_14930 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g34690.1 LOC_Os01g34690 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g42520.1 LOC_Os01g42520 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g55190.1 LOC_Os01g55190 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g11040.1 LOC_Os02g11040 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g59300.1 LOC_Os03g59300 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os04g41740.1 LOC_Os04g41740 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g04050.1 LOC_Os07g04050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g10620.1 LOC_Os07g10620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10434741g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_251322g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_44504g0020 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_770477g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_89188g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc01g087540.4.1 Solyc01g087540 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc02g070540.3.1 Solyc02g070540 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc03g120040.3.1 Solyc03g120040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g015610.3.1 Solyc04g015610 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g042930.2.1 Solyc12g042930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e007713_P001 Zm00001e007713 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e013973_P001 Zm00001e013973 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019773_P002 Zm00001e019773 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006946 DGR2-like_dom 203 369
IPR006946 DGR2-like_dom 35 191
No external refs found!