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Gb_03499 (XRN3, AtXRN3)


Aliases : XRN3, AtXRN3

Description : 5-3 exoribonuclease 3 OS=Arabidopsis thaliana (sp|q9fq03|xrn3_arath : 529.0)


Gene families : OG0000769 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000769_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03499
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0149.g053258 XRN3, AtXRN3 exoribonuclease *(RAT1/XRN2) & original description: CDS=205-3336 0.04 OrthoFinder output from all 47 species
Azfi_s0236.g059553 EIN5, AIN1, XRN4, ATXRN4 exoribonuclease *(XRN4) & original description: CDS=1782-4652 0.04 OrthoFinder output from all 47 species
Cre06.g280050 XRN3, AtXRN3 5-3 exoribonuclease 3 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Lfl_g19229 EIN5, AIN1, XRN4, ATXRN4 exoribonuclease *(XRN4) & original description: none 0.02 OrthoFinder output from all 47 species
MA_17503g0010 XRN3, AtXRN3 5-3 exoribonuclease 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g08820.1 XRN3, AtXRN3 exoribonuclease (RAT1/XRN2) 0.02 OrthoFinder output from all 47 species
Sam_g12064 No alias exoribonuclease *(RAT1/XRN2) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004527 exonuclease activity IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 279 293
IPR041412 Xrn1_helical 344 379
IPR004859 Xrn1_N 1 269
No external refs found!