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  5. Gb_03302

Gb_03302


Description : anion channel (QUAC/ALMT)


Gene families : OG0000412 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000412_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_03302
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00044700 evm_27.TU.AmTr_v1... Solute transport.channels.QUAC/ALMT anion channel 0.02 OrthoFinder output from all 47 species
AT1G68600 No alias Aluminium activated malate transporter family protein 0.03 OrthoFinder output from all 47 species
GSVIVT01011148001 No alias Solute transport.channels.QUAC/ALMT anion channel 0.03 OrthoFinder output from all 47 species
LOC_Os02g45160.1 LOC_Os02g45160 anion channel (QUAC/ALMT) 0.04 OrthoFinder output from all 47 species
LOC_Os02g49790.1 ALMT9, AtALMT9,... anion channel (QUAC/ALMT) 0.02 OrthoFinder output from all 47 species
LOC_Os04g47930.1 LOC_Os04g47930 anion channel (QUAC/ALMT) 0.03 OrthoFinder output from all 47 species
LOC_Os10g42180.1 ATALMT12,... anion channel (QUAC/ALMT) 0.03 OrthoFinder output from all 47 species
Msp_g19210 ATALMT12, ALMT12 anion channel *(QUAC/ALMT) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30061 ALMT9, AtALMT9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g096140.3.1 Solyc01g096140 anion channel (QUAC/ALMT) 0.04 OrthoFinder output from all 47 species
Solyc06g061100.4.1 ATALMT12,... anion channel (QUAC/ALMT) 0.02 OrthoFinder output from all 47 species
Solyc08g082950.4.1 Solyc08g082950 anion channel (QUAC/ALMT) 0.05 OrthoFinder output from all 47 species
Zm00001e015407_P002 Zm00001e015407 anion channel (QUAC/ALMT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015743 malate transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0003333 amino acid transmembrane transport IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR020966 ALMT 156 487
No external refs found!