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  5. Gb_02799

Gb_02799


Description : histone demethylase (PKDM8). transcription factor (JUMONJI)


Gene families : OG0002434 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002434_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02799

Target Alias Description ECC score Gene Family Method Actions
Als_g52529 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024382001 No alias Protein modification.phosphorylation.TKL kinase... 0.04 OrthoFinder output from all 47 species
Gb_21111 No alias histone demethylase (PKDM8). transcription factor (JUMONJI) 0.04 OrthoFinder output from all 47 species
Nbi_g05487 No alias histone demethylase *(PKDM8) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41949 No alias histone demethylase *(PKDM8) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012910 No alias histone demethylase *(PKDM8) & original description: CDS=45-3857 0.02 OrthoFinder output from all 47 species
Zm00001e012998_P005 Zm00001e012998 histone demethylase (PKDM8). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR004198 Znf_C5HC2 502 552
IPR003349 JmjN 103 135
IPR003347 JmjC_dom 279 402
No external refs found!