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  5. Gb_02775

Gb_02775


Description : no hits & (original description: none)


Gene families : OG0000514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000514_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02775
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00111920 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G48050 No alias BAH domain ;TFIIS helical bundle-like domain 0.09 OrthoFinder output from all 47 species
AT3G48060 No alias BAH domain ;TFIIS helical bundle-like domain 0.04 OrthoFinder output from all 47 species
AT4G24200 No alias Transcription elongation factor (TFIIS) family protein 0.03 OrthoFinder output from all 47 species
Adi_g097046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20600 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Als_g62379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03624 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Aop_g05279 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene13012.t1 Aspi01Gene13012 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0100.g044240 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Azfi_s0124.g048462 No alias not classified & original description: CDS=36-3404 0.04 OrthoFinder output from all 47 species
Ceric.02G029300.1 Ceric.02G029300 not classified & original description: pacid=50584188... 0.05 OrthoFinder output from all 47 species
Ceric.24G078000.1 Ceric.24G078000 regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Dcu_g09005 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Dcu_g51442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21335 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
GSVIVT01007806001 No alias No description available 0.09 OrthoFinder output from all 47 species
GSVIVT01009936001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01024041001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01032521001 No alias No description available 0.06 OrthoFinder output from all 47 species
Lfl_g11979 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
MA_10428034g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_33300g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_39143g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_39143g0020 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_710118g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp4g16160.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp4g16230.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Nbi_g04481 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Ore_g00447 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g01867 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g15157 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16149 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g16150 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25799 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Pir_g06454 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Pir_g13634 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Pir_g40502 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Pnu_g31632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005665 No alias not classified & original description: CDS=481-3921 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0081.g018052 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Sam_g04139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g04915 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g08181 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29218 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Smo440870 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc03g114060.3.1 Solyc03g114060 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc06g071350.4.1 Solyc06g071350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g089320.3.1 Solyc12g089320 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Spa_g25845 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Zm00001e002441_P003 Zm00001e002441 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e013353_P001 Zm00001e013353 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e037792_P001 Zm00001e037792 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e037793_P001 Zm00001e037793 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001025 BAH_dom 34 141
IPR017923 TFIIS_N 352 401
No external refs found!