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  5. Gb_02392

Gb_02392


Description : component GCP5 of gamma-Tubulin ring complex (gamma-TuRC)


Gene families : OG0005639 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005639_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02392

Target Alias Description ECC score Gene Family Method Actions
AT1G80260 emb1427 Spc97 / Spc98 family of spindle pole body (SBP) component 0.03 OrthoFinder output from all 47 species
Cre10.g430900 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os12g41290.1 emb1427, LOC_Os12g41290 component GCP5 of gamma-Tubulin ring complex (gamma-TuRC) 0.04 OrthoFinder output from all 47 species
MA_10434417g0010 emb1427 component GCP5 of gamma-Tubulin ring complex (gamma-TuRC) 0.02 OrthoFinder output from all 47 species
Mp2g08990.1 emb1427 component GCP5 of gamma-Tubulin ring complex (gamma-TuRC) 0.02 OrthoFinder output from all 47 species
Solyc04g079390.3.1 emb1427, Solyc04g079390 component GCP5 of gamma-Tubulin ring complex (gamma-TuRC) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043015 gamma-tubulin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR041470 GCP_N 183 352
IPR040457 GCP_C 720 868
No external refs found!