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  5. Gb_02329

Gb_02329


Description : SHOU4-type cellulose synthase CSC-interactive protein


Gene families : OG0000929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02329

Target Alias Description ECC score Gene Family Method Actions
AT1G78880 No alias Ubiquitin-specific protease family C19-related protein 0.03 OrthoFinder output from all 47 species
Adi_g023365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02232 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Ala_g14842 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Aob_g01916 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Aop_g14554 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008401 No alias not classified & original description: CDS=558-1895 0.02 OrthoFinder output from all 47 species
Azfi_s0269.g061132 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Cba_g05871 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Ceric.12G073600.1 Ceric.12G073600 regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Dde_g02263 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Ehy_g12547 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
GSVIVT01016057001 No alias Uncharacterized membrane protein At1g16860... 0.03 OrthoFinder output from all 47 species
LOC_Os04g51710.1 LOC_Os04g51710 SHOU4-type cellulose synthase CSC-interactive protein 0.02 OrthoFinder output from all 47 species
LOC_Os08g13350.1 LOC_Os08g13350 SHOU4-type cellulose synthase CSC-interactive protein 0.05 OrthoFinder output from all 47 species
Lfl_g29225 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
MA_10432016g0010 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species
Nbi_g05342 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Nbi_g10144 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Ppi_g15553 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Sam_g16842 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Solyc12g017450.2.1 Solyc12g017450 SHOU4-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species
Spa_g18005 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Spa_g18006 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Spa_g22872 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Zm00001e007013_P001 Zm00001e007013 SHOU4-type cellulose synthase CSC-interactive protein 0.04 OrthoFinder output from all 47 species
Zm00001e022289_P002 Zm00001e022289 SHOU4-type cellulose synthase CSC-interactive protein 0.04 OrthoFinder output from all 47 species
Zm00001e040067_P002 Zm00001e040067 SHOU4-type cellulose synthase CSC-interactive protein 0.02 OrthoFinder output from all 47 species
Zm00001e041596_P001 Zm00001e041596 SHOU4-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!