Gb_02250 (AMY3, ATAMY3)

Aliases : AMY3, ATAMY3

Description : alpha amylase

Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_02250

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00078p00105470	AMY3, ATAMY3,...	Carbohydrate metabolism.starch...	0.02	OrthoFinder output from all 47 species
Azfi_s0065.g035819	AMY1, ATAMY1	alpha amylase & original description: CDS=222-1931	0.03	OrthoFinder output from all 47 species
Ehy_g15848	AMY2, ATAMY2	alpha amylase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01020069001	AMY3, ATAMY3	Carbohydrate metabolism.starch...	0.03	OrthoFinder output from all 47 species
LOC_Os01g51754.1	AMY3, ATAMY3,...	alpha amylase	0.02	OrthoFinder output from all 47 species
LOC_Os06g49970.2	AMY1, ATAMY1,...	alpha amylase	0.02	OrthoFinder output from all 47 species
Mp2g22120.1	AMY2, ATAMY2	alpha amylase	0.02	OrthoFinder output from all 47 species
Ppi_g02358	AMY3, ATAMY3	alpha amylase & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g18959	AMY3, ATAMY3	alpha amylase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e009946_P001	AMY1, ATAMY1,...	alpha amylase	0.03	OrthoFinder output from all 47 species
Zm00001e015947_P002	AMY1, ATAMY1,...	alpha amylase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	IEA	Interproscan
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004556	alpha-amylase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity	IEP	HCCA
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006047	Glyco_hydro_13_cat_dom	664	947
IPR012850	A-amylase_bs_C	968	1026

External Links

No external refs found!