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  5. Gb_02083

Gb_02083 (ICU4, ATHB15, ATHB-15, CNA)


Aliases : ICU4, ATHB15, ATHB-15, CNA

Description : transcription factor (HD-ZIP III)


Gene families : OG0000446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_02083

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00085520 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AMTR_s00148p00033940 PHB-1D, ATHB-14,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AMTR_s00155p00069240 PHB-1D, ATHB-14,... RNA biosynthesis.transcriptional activation.HB... 0.05 OrthoFinder output from all 47 species
AT1G52150 ICU4, ATHB15,... Homeobox-leucine zipper family protein / lipid-binding... 0.05 OrthoFinder output from all 47 species
AT4G32880 HB-8, ATHB8, ATHB-8 homeobox gene 8 0.04 OrthoFinder output from all 47 species
Als_g09861 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22190 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G076100.1 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.18G068400.1 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g26929 HB-8, ATHB8, ATHB-8 HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017010001 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.06 OrthoFinder output from all 47 species
GSVIVT01025193001 IFL1, IFL, REV RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
GSVIVT01035612001 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
LOC_Os03g43930.1 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.06 OrthoFinder output from all 47 species
LOC_Os12g41860.1 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Lfl_g26487 ICU4, ATHB15,... HD-ZIP III-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435903g0010 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
MA_19520g0020 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
MA_41083g0010 PHV, ATHB9 pepsin-type protease 0.05 OrthoFinder output from all 47 species
Mp1g24140.1 HB-8, ATHB8, ATHB-8 transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Ore_g44133 HB-8, ATHB8, ATHB-8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22245 PHB-1D, ATHB-14,... HD-ZIP III-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo270225 ICU4, ATHB15,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Solyc08g066500.4.1 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.05 OrthoFinder output from all 47 species
Solyc11g069470.3.1 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
Solyc12g044410.2.1 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
Spa_g49880 ICU4, ATHB15,... transcriptional co-regulator *(ZPR) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000073_P001 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Zm00001e004553_P004 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.05 OrthoFinder output from all 47 species
Zm00001e005034_P001 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.06 OrthoFinder output from all 47 species
Zm00001e012408_P002 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.04 OrthoFinder output from all 47 species
Zm00001e018118_P002 PHB-1D, ATHB-14,... transcription factor (HD-ZIP III) 0.06 OrthoFinder output from all 47 species
Zm00001e025995_P002 ICU4, ATHB15,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species
Zm00001e039093_P002 IFL1, IFL, REV,... transcription factor (HD-ZIP III) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 15 73
IPR002913 START_lipid-bd_dom 213 330
IPR013978 MEKHLA 657 799
No external refs found!