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  5. Gb_01582

Gb_01582


Description : Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidopsis thaliana (sp|q9sz10|pp338_arath : 466.0)


Gene families : OG0002597 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002597_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_01582
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00111980 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g09820... 0.03 OrthoFinder output from all 47 species
AMTR_s00048p00141020 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g01110... 0.04 OrthoFinder output from all 47 species
AT4G26680 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G01110 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 OrthoFinder output from all 47 species
GSVIVT01009638001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01018339001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01025017001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Gb_03214 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Gb_12831 No alias Pentatricopeptide repeat-containing protein At1g05670,... 0.05 OrthoFinder output from all 47 species
LOC_Os03g06910.1 LOC_Os03g06910 Pentatricopeptide repeat-containing protein At5g01110... 0.02 OrthoFinder output from all 47 species
LOC_Os05g19390.1 LOC_Os05g19390 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_302333g0010 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.05 OrthoFinder output from all 47 species
MA_59385g0010 No alias Pentatricopeptide repeat-containing protein At3g54980,... 0.06 OrthoFinder output from all 47 species
MA_64750g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc02g021270.3.1 Solyc02g021270 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Solyc05g051340.3.1 Solyc05g051340 group-II intron mitochondrial splicing factor (MISF26) 0.03 OrthoFinder output from all 47 species
Solyc07g047620.3.1 Solyc07g047620 Pentatricopeptide repeat-containing protein At4g26680,... 0.04 OrthoFinder output from all 47 species
Solyc11g073270.1.1 Solyc11g073270 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Zm00001e007886_P001 Zm00001e007886 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 419 444
IPR002885 Pentatricopeptide_repeat 449 496
IPR002885 Pentatricopeptide_repeat 274 322
IPR002885 Pentatricopeptide_repeat 204 253
IPR002885 Pentatricopeptide_repeat 345 393
No external refs found!