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  5. Gb_01420

Gb_01420


Description : Pectinesterase inhibitor 6 OS=Arabidopsis thaliana (sp|o22244|pmei6_arath : 103.0)


Gene families : OG0000683 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000683_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_01420
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00229990 evm_27.TU.AmTr_v1... 21 kDa protein OS=Daucus carota 0.03 OrthoFinder output from all 47 species
AT2G47670 No alias Plant invertase/pectin methylesterase inhibitor... 0.03 OrthoFinder output from all 47 species
AT4G00080 UNE11 Plant invertase/pectin methylesterase inhibitor... 0.03 OrthoFinder output from all 47 species
AT5G62340 No alias Plant invertase/pectin methylesterase inhibitor... 0.03 OrthoFinder output from all 47 species
Ala_g10951 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g53230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G068800.1 Ceric.11G068800 not classified & original description: pacid=50596777... 0.03 OrthoFinder output from all 47 species
Ceric.1Z036700.1 Ceric.1Z036700 not classified & original description: pacid=50632723... 0.03 OrthoFinder output from all 47 species
Dac_g19898 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g10560.1 LOC_Os10g10560 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10426321g0010 ATPME3, PME3 Pectinesterase/pectinesterase inhibitor U1 OS=Solanum... 0.03 OrthoFinder output from all 47 species
MA_10434137g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_29344g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_508247g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Pir_g17216 PME26, ATPMEPCRC, ATPME26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g21506 No alias pectin methylesterase inhibitor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g40177 UNE11 pectin methylesterase inhibitor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49650 No alias pectin methylesterase inhibitor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05776 No alias pectin methylesterase inhibitor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g05777 No alias pectin methylesterase inhibitor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006139 No alias not classified & original description: CDS=1-1101 0.05 OrthoFinder output from all 47 species
Solyc06g034370.1.1 Solyc06g034370 21 kDa protein OS=Daucus carota (sp|p17407|21kd_dauca : 189.0) 0.03 OrthoFinder output from all 47 species
Solyc07g042390.3.1 Solyc07g042390 Pectinesterase inhibitor 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g14191 PME26, ATPMEPCRC, ATPME26 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 104 253
No external refs found!