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Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer
Gene families : OG0000735 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000735_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_00381 | |
| Cluster | HCCA: Cluster_88 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00079p00061090 | evm_27.TU.AmTr_v1... | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.12 | OrthoFinder output from all 47 species | |
| AT1G67090 | RBCS1A | ribulose bisphosphate carboxylase small chain 1A | 0.05 | OrthoFinder output from all 47 species | |
| AT5G38410 | No alias | Ribulose bisphosphate carboxylase (small chain) family protein | 0.07 | OrthoFinder output from all 47 species | |
| AT5G38420 | No alias | Ribulose bisphosphate carboxylase (small chain) family protein | 0.06 | OrthoFinder output from all 47 species | |
| AT5G38430 | No alias | Ribulose bisphosphate carboxylase (small chain) family protein | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g09842 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g19484 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g08171 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g09818 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.08 | OrthoFinder output from all 47 species | |
| Aob_g24117 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g33021 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G050600.1 | RBCS1A, Ceric.09G050600 | small subunit of ribulose-1,5-bisphosphat... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.09G050800.1 | RBCS1A, Ceric.09G050800 | small subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.09G050900.1 | RBCS1A, Ceric.09G050900 | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.09G051100.1 | RBCS1A, Ceric.09G051100 | small subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.09G051300.1 | RBCS1A, Ceric.09G051300 | small subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.09G051400.1 | RBCS1A, Ceric.09G051400 | small subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.09G051500.1 | RBCS1A, Ceric.09G051500 | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.09G051600.1 | RBCS1A, Ceric.09G051600 | small subunit of ribulose-1,5-bisphosphat... | 0.18 | OrthoFinder output from all 47 species | |
| Ceric.09G051700.1 | RBCS1A, Ceric.09G051700 | small subunit of ribulose-1,5-bisphosphat... | 0.11 | OrthoFinder output from all 47 species | |
| Ceric.09G051800.1 | RBCS1A, Ceric.09G051800 | small subunit of ribulose-1,5-bisphosphat... | 0.14 | OrthoFinder output from all 47 species | |
| Cre02.g120100 | RBCS1A | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Cre02.g120150 | RBCS1A | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g09882 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g20638 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.16 | OrthoFinder output from all 47 species | |
| Dcu_g33446 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.17 | OrthoFinder output from all 47 species | |
| Dcu_g51202 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.17 | OrthoFinder output from all 47 species | |
| Dde_g36766 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.1 | OrthoFinder output from all 47 species | |
| GSVIVT01008288001 | No alias | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os12g17600.1 | RBCS1A, LOC_Os12g17600 | small subunit of ribulose-1,5-bisphosphat... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os12g19470.2 | RBCS1A, LOC_Os12g19470 | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g06030.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g15080.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g16796 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g54622 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.09 | OrthoFinder output from all 47 species | |
| Pnu_g12024 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c13_15980V3.1 | RBCS1A, Pp3c13_15980 | ribulose bisphosphate carboxylase small chain 1A | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c19_1840V3.1 | RBCS1A, Pp3c19_1840 | Ribulose bisphosphate carboxylase (small chain) family protein | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c3_14510V3.1 | RBCS1A, Pp3c3_14510 | ribulose bisphosphate carboxylase small chain 1A | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g32726 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g60704 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0042.g012718 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0124.g021603 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g063150.3.1 | Solyc02g063150 | small subunit of ribulose-1,5-bisphosphat... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc02g085950.4.1 | Solyc02g085950 | small subunit of ribulose-1,5-bisphosphat... | 0.11 | OrthoFinder output from all 47 species | |
| Solyc03g034220.3.1 | Solyc03g034220 | small subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005509 | calcium ion binding | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |