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  5. Cpa|evm.model.tig00021795.8

Cpa|evm.model.tig00021795.8


No description available


Gene families : OG0001029 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001029_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021795.8

Target Alias Description ECC score Gene Family Method Actions
Adi_g058887 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Adi_g109689 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Als_g01040 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Aspi01Gene50087.t1 VFB4, SKIP2,... substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene63599.t2 VFB4, SKIP2,... substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
LOC_Os04g42670.1 VFB4, SKIP2,... component FBX of SCF E3 ubiquitin ligase complex 0.01 OrthoFinder output from all 47 species
MA_10431549g0010 VFB4, SKIP2 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g03956 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pnu_g10067 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Sam_g17864 No alias substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 67 101
No external refs found!