Description : Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.diaminopimelate epimerase
Gene families : OG0003705 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003705_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cpa|evm.model.tig00021721.4 | |
Cluster | HCCA: Cluster_27 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g07726 | No alias | EC_5.1 racemase or epimerase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g08441 | No alias | EC_5.1 racemase or epimerase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e002914_P004 | Zm00001e002914 | diaminopimelate epimerase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e018185_P007 | Zm00001e018185 | diaminopimelate epimerase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008837 | diaminopimelate epimerase activity | IEA | Interproscan |
BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004177 | aminopeptidase activity | IEP | HCCA |
CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
No external refs found! |