1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00021720.13

Cpa|evm.model.tig00021720.13 (CEN2)


Aliases : CEN2

Description : RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.CEN centrin component


Gene families : OG0001195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001195_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021720.13
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Ceric.16G004400.1 CEN2, Ceric.16G004400 calcium sensor *(CML) & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.26G068400.1 CEN2, Ceric.26G068400 calcium sensor *(CML) & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.38G049700.1 CEN2, Ceric.38G049700 calcium sensor *(CML) & original description:... 0.01 OrthoFinder output from all 47 species
Dcu_g14725 CEN2 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g03142 CEN2 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g00334 CEN2 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Gb_17676 CEN2, CEN1, ATCEN2 DNA repair protein (CEN2). centrin component CEN of... 0.02 OrthoFinder output from all 47 species
Pir_g13265 CEN2 calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g05891 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g48339 CEN2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g29841 CEN2 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005815 microtubule organizing center IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 499 562
IPR002048 EF_hand_dom 426 488
No external refs found!