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  5. Cpa|evm.model.tig00021464.57

Cpa|evm.model.tig00021464.57 (AGD6)


Aliases : AGD6

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein


Gene families : OG0001922 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001922_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021464.57

Target Alias Description ECC score Gene Family Method Actions
AT4G17890 AGD8 ARF-GAP domain 8 0.05 OrthoFinder output from all 47 species
Aspi01Gene05486.t1 AGD9, Aspi01Gene05486 class II ARF-GAP ARF-GTPase-activating protein &... 0.02 OrthoFinder output from all 47 species
Ceric.01G027900.1 AGD8, Ceric.01G027900 class II ARF-GAP ARF-GTPase-activating protein &... 0.01 OrthoFinder output from all 47 species
Dac_g00745 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.03 OrthoFinder output from all 47 species
Dde_g01540 AGD9 class II ARF-GAP ARF-GTPase-activating protein &... 0.01 OrthoFinder output from all 47 species
Dde_g05294 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.02 OrthoFinder output from all 47 species
Gb_31196 AGD8 class II ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species
LOC_Os10g42420.1 AGD8, LOC_Os10g42420 class II ARF-GAP ARF-GTPase-activating protein 0.01 OrthoFinder output from all 47 species
Len_g55685 AGD9 class II ARF-GAP ARF-GTPase-activating protein &... 0.01 OrthoFinder output from all 47 species
Mp8g08200.1 AGD8 class II ARF-GAP ARF-GTPase-activating protein 0.01 OrthoFinder output from all 47 species
Solyc08g076920.3.1 AGD9, Solyc08g076920 class II ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species
Spa_g18253 AGD8 class II ARF-GAP ARF-GTPase-activating protein &... 0.01 OrthoFinder output from all 47 species
Spa_g39446 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e006404_P001 AGD8, Zm00001e006404 class II ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species
Zm00001e011636_P001 AGD9, Zm00001e011636 class II ARF-GAP ARF-GTPase-activating protein 0.01 OrthoFinder output from all 47 species
Zm00001e037787_P001 AGD9, Zm00001e037787 ADP-ribosylation factor GTPase-activating protein AGD10... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR001164 ArfGAP_dom 14 118
No external refs found!