Cpa|evm.model.tig00021432.32 (BCDH BETA1)


Aliases : BCDH BETA1

Description : Amino acid metabolism.degradation.branched-chain amino acid.branched-chain alpha-keto acid dehydrogenase complex.E1 2-oxoisovalerate dehydrogenase subcomplex.beta subunit


Gene families : OG0006868 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006868_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021432.32
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00075280 BCDH BETA1,... Amino acid metabolism.degradation.branched-chain amino... 0.01 OrthoFinder output from all 47 species
Solyc01g028900.3.1 DIN4, Solyc01g028900 subunit beta of E1 2-oxoisovalerate dehydrogenase subcomplex 0.03 OrthoFinder output from all 47 species
Zm00001e011471_P001 BCDH BETA1,... subunit beta of E1 2-oxoisovalerate dehydrogenase subcomplex 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001514 selenocysteine incorporation IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006451 translational readthrough IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005475 Transketolase-like_Pyr-bd 73 248
IPR033248 Transketolase_C 264 372
No external refs found!