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  5. Cpa|evm.model.tig00021432.32

Cpa|evm.model.tig00021432.32 (BCDH BETA1)


Aliases : BCDH BETA1

Description : Amino acid metabolism.degradation.branched-chain amino acid.branched-chain alpha-keto acid dehydrogenase complex.E1 2-oxoisovalerate dehydrogenase subcomplex.beta subunit


Gene families : OG0006868 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006868_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021432.32
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00075280 BCDH BETA1,... Amino acid metabolism.degradation.branched-chain amino... 0.01 OrthoFinder output from all 47 species
Solyc01g028900.3.1 DIN4, Solyc01g028900 subunit beta of E1 2-oxoisovalerate dehydrogenase subcomplex 0.03 OrthoFinder output from all 47 species
Zm00001e011471_P001 BCDH BETA1,... subunit beta of E1 2-oxoisovalerate dehydrogenase subcomplex 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001514 selenocysteine incorporation IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006451 translational readthrough IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005475 Transketolase-like_Pyr-bd 73 248
IPR033248 Transketolase_C 264 372
No external refs found!