1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00021357.6

Cpa|evm.model.tig00021357.6


No description available


Gene families : OG0005799 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005799_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021357.6

Target Alias Description ECC score Gene Family Method Actions
Cba_g01878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre12.g508200 No alias No description available 0.04 OrthoFinder output from all 47 species
Dcu_g15147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os10g31520.1 LOC_Os10g31520 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Lfl_g38385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g26330.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Sam_g14695 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g14696 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo107582 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc02g069950.3.1 Solyc02g069950 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g10809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!