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  5. Cpa|evm.model.tig00021351.15

Cpa|evm.model.tig00021351.15 (Y14)


Aliases : Y14

Description : RNA processing.RNA quality control Exon Junction complex (EJC).core components.Y14 component


Gene families : OG0003013 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021351.15
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Adi_g008368 Y14 component *(Y14) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Adi_g008369 Y14 component *(Y14) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Als_g23384 Y14 component *(Y14) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Aob_g05683 Y14 component *(Y14) of RNA quality control Exon Junction... 0.01 OrthoFinder output from all 47 species
Aspi01Gene25491.t1 Y14, Aspi01Gene25491 component *(Y14) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Azfi_s0049.g030862 Y14 component *(Y14) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Ceric.01G113200.1 Y14, Ceric.01G113200 component *(Y14) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Cre12.g526750 Y14 RNA processing.RNA quality control Exon Junction complex... 0.09 OrthoFinder output from all 47 species
GSVIVT01026504001 Y14 RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder output from all 47 species
LOC_Os05g04850.1 Y14, LOC_Os05g04850 component Y14 of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
Len_g37404 Y14 component *(Y14) of RNA quality control Exon Junction... 0.01 OrthoFinder output from all 47 species
Mp5g04230.1 Y14 component Y14 of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
Pp3c7_3000V3.1 Y14, Pp3c7_3000 RNA-binding (RRM/RBD/RNP motifs) family protein 0.01 OrthoFinder output from all 47 species
Smo100512 Y14 RNA processing.RNA quality control Exon Junction complex... 0.02 OrthoFinder output from all 47 species
Spa_g26169 Y14 component *(Y14) of RNA quality control Exon Junction... 0.01 OrthoFinder output from all 47 species
Tin_g04336 Y14 component *(Y14) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003714 transcription corepressor activity IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 81 129
No external refs found!