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  5. Cpa|evm.model.tig00021350.32

Cpa|evm.model.tig00021350.32 (ATACS7, ACS7)


Aliases : ATACS7, ACS7

Description : 1-aminocyclopropane-1-carboxylate synthase 7 OS=Arabidopsis thaliana


Gene families : OG0001919 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001919_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021350.32
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Aev_g11065 ACS8 EC_4.4 carbon-sulfur lyase & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0335.g065524 ACS12 EC_4.4 carbon-sulfur lyase & original description: CDS=1-1548 0.02 OrthoFinder output from all 47 species
Msp_g04837 ACS12 EC_4.4 carbon-sulfur lyase & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g17708 ACS12 EC_4.4 carbon-sulfur lyase & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g25381 ACS12 EC_4.4 carbon-sulfur lyase & original description: none 0.01 OrthoFinder output from all 47 species
Smo75495 AtACS9, ETO3, ACS9 Enzyme classification.EC_4 lyases.EC_4.4 carbon-sulfur... 0.01 OrthoFinder output from all 47 species
Solyc03g007070.3.1 ACS12, Solyc03g007070 Probable aminotransferase ACS12 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004000 adenosine deaminase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006382 adenosine to inosine editing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016553 base conversion or substitution editing IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 191 328
No external refs found!