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  5. Cpa|evm.model.tig00021319.42

Cpa|evm.model.tig00021319.42 (GLN1.3, ATGSKB6, GLN1;3)


Aliases : GLN1.3, ATGSKB6, GLN1;3

Description : Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamine synthetase


Gene families : OG0000646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00021319.42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00116070 ATGSR1, GLN1;1,... Nutrient uptake.nitrogen assimilation.ammonium... 0.05 OrthoFinder output from all 47 species
AT5G35630 GS2, ATGSL1, GLN2 glutamine synthetase 2 0.09 OrthoFinder output from all 47 species
Aob_g04960 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
Aop_g10805 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene53323.t1 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011642 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
Cba_g08502 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
Ceric.26G044000.1 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Dcu_g02754 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
Dde_g08307 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Dde_g08605 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
GSVIVT01017868001 GS2, ATGSL1, GLN2 Nutrient uptake.nitrogen assimilation.ammonium... 0.03 OrthoFinder output from all 47 species
Gb_12976 GLN1;4 Glutamine synthetase cytosolic isozyme OS=Pinus... 0.03 OrthoFinder output from all 47 species
LOC_Os04g56400.1 GS2, ATGSL1,... plastidial glutamine synthetase (GLN2) 0.05 OrthoFinder output from all 47 species
Len_g16696 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Lfl_g07274 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Lfl_g12475 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Mp1g24330.1 GLN1.3, ATGSKB6, GLN1;3 Glutamine synthetase, chloroplastic OS=Chlamydomonas... 0.04 OrthoFinder output from all 47 species
Msp_g12421 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
Pir_g13405 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Pir_g59187 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.01 OrthoFinder output from all 47 species
Pp3c20_22820V3.1 GS2, ATGSL1,... glutamine synthetase 2 0.02 OrthoFinder output from all 47 species
Ppi_g31945 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Solyc01g080280.3.1 GS2, ATGSL1,... plastidial glutamine synthetase (GLN2) 0.04 OrthoFinder output from all 47 species
Tin_g12121 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEA Interproscan
BP GO:0006807 nitrogen compound metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004347 glucose-6-phosphate isomerase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008146 Gln_synth_cat_dom 186 420
No external refs found!